SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36539_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.39 TPM:1.75
ORF EntryO_ErmoMG13433_internal:A_ErmoMG_comp36539_c0_seq2
Sequence
(Nucleotide)
CGCGGCGCTGGTGCCGGGTGCGGGGGGTGTGTGCGGGCGCGCGGGTGTCGCGCGGGCCCG
ACTGGAAGTGGCGCGACCAGGACGGACAGCATCCTGCGCTCGGAACACTTACTTCAGAAC
TACATAACGGCTGGGTTGACGTAAGGTGGGACCACGGTGTTCGTAATTCTTATCGAATGG
GCGCTGAGGGCAAATTCGATCTAAAAGTAGTGAGCGGTGGTACTGTCATCGAAAGTTCTA
AGGCCGGTAGAAAAAGTCATTCTACTCCTAGCCTACCCGATGCCACATCTGTTGATCAGG
TGTCGGTCGCATCGACAGAACAGGCATCTTCAGCTGACAACATATCAAGTGAAGAAATGG
TCAGTAATATGTCAAGACCCCGAACGCATGCAACTGATCTCTCGGCTATTAATAATTCAA
CCCATCATATCAACTCTGTGTTTGATATAGATCTAGCGACTATAGTGGAGTCATTAACGC
TCGGAGCAGAGAGCAACAACTGTATGTCCGAGTTGGGCAACACATCCTTTACTAATATGG
AAATGGGACCTACCAGTATTACAGACATTACCAAACCATATCCAGCCAAAGAACCATTGC
CTGAATCTAGTACACACGAGTGTGACGAAAATGTAGTTGGAGAAAGTCAGTATGAAGATA
ATAAGAAGGAGAACCAGTCTGGTTCTGGGACTATGAGTGCTAGTGAACCTGATTTGACAC
AACAGGGCACGGGGCGACTGTTAGAGTCTCTGGGGGTCGGGCGCGGCTGCGGCGCCGGAC
GCGGCAGCAACACGCAGCGCTCCAACCGCAACAACCACTCCTCCGGACTCCTGCCCAGTT
TGG
(843 bp)

- SilkBase 1999-2023 -