SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36539_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0001779 P natural killer cell differentiation
GO:0001843 P neural tube closure
GO:0001892 P embryonic placenta development
GO:0003170 P heart valve development
GO:0003281 P ventricular septum development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035904 P aorta development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0060707 P trophoblast giant cell differentiation
GO:0060708 P spongiotrophoblast differentiation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:1903077 P negative regulation of protein localization to plasma membrane
Transcript
Level		FPKM:1.04 TPM:0.77
ORF EntryO_ErmoMG13430_internal:A_ErmoMG_comp36539_c0_seq1
Sequence
(Nucleotide)
CAGCTCGTCGCCATGGCGCCCTCGCAGCCTTCCGCACCCGCTATACCGTTCTCTGGGTCG
CTAGGCTCATCCTCCTCACTATCGCTTGATGCATTCAAATTGTCTGCTCCCTCCACTTCT
TTATATGTTAATGTGTATGTGGTGTCCCGATGCAGGTCGGCGTGCGGCAGACGCGAGTGC
AGCAGCAGCACGGCGCGGTACAGCGTCCACGAGCCGCGCTGCAGCGGCACCGACACGCCG
CCCGCGCTCAGCCACAGCCGCAGCGAGGGCGCCGCCCGACCCGCGCTCGCGTTACTGACG
TTACTGGCGTTACCGGCGTCACCGACGTTAGTACAGCTTGCACTCTCCGACACCTCGTCC
CAACTCTCCTCTTCAGATTCTTCAGTCAATGGTATTTCGAGATCAACAGTTTGGTTGAGA
TTCGTCCTGCCAGGGCGGGGATCAAAAGCCGGTATAAGCGCTGAGAACTGTCGCTTGAGT
ACAAAGTCATCGTCCCAAGGTCGACGCGACCGATTGTTCCCTCCGGATCCTGCCCCACTA
CGCACCGCCTCTAAAGCTTCTTCCTCCATCAATGATAACAAATTCCGAGATACCTCCTGG
TACGTGGGTTCGTTCTCTTTGTCGCTGTCGAGCGCCTCGTCCCCTTCCTCGTCGTCCTCT
AGCTCCGTCAGCAAGGCGGGCGCGCGACACGACTCCAGGAAGTCCTCTAACGACACCTGT
TCACTCTCACTCGAAGTTGATGTGAGCGACAATGTAAGTGCATTCTGTGCGTTAGAGGAC
AGTGAAGGGTAGCTTTGCGCTGCCGATAATAACCCACCAGGGAAGTTGCTTGACAAAGCC
AAACGCACCAAACTGGGCAGGAGTCCGGAGGA
(872 bp)

- SilkBase 1999-2023 -