SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36530_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagenase-like_[Bombyx_mori]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level		FPKM:17334.89 TPM:12754.85
ORF EntryO_ErmoMG13377_5prime_partial:A_ErmoMG_comp36530_c0_seq2
Sequence
(Nucleotide)
GGCGGAGTACGAGCCTATTGAACTTGACTACCACGAGAATGTCGGTATCCCGATGTACGA
GAGCATGAAGCGCTCTGAGGAGGCAGCCGACTTCGACGGCGCCAGGATCGTAGGAGGATC
TACCGCTGGAGCTGGAACACACCCTCATCTTGGAGGATTAATAGTTACTCTTACAACTGG
TGCAACTTCTATGTGCGGATGCTCATTGTTGAGCAACACTCGCTGTCTGACCGCCGCTCA
CTGCTGGAGAACCAGGACATCCCAGGGTCGGTCTTTGGTGGCCGCTTTCGGTACTGCCAA
CATCCTGTCAGGTGGTACCAGAGTCACCTCCAGTAACATCCAGATGCACGCCAGCTACAA
CATGAACAACCTCAACCACGACATCGCCATGATCGTTCACCCCTGGGTCGGCTTCACCAA
TGTAATCCAGCGCGTGTTCTTGCCCACCGGTGGACTCGCCAACAACCAATTCGCCGGTAC
CTGGGCGTGGGCTGCTGGATTCGGAAGGACATCTGATGCCGCGTGGGGAGCAAACAACCG
TCAGAAGCACCAAGTGAGCCTCCAAGTTATCACCAACGCCGTCTGTCAACAAACCTACGG
CCCTTCGACCATCATCGCCGCCACCCTCTGCACCAGCACCCAGGGCGGTCGCAGCACCTG
CAGCGGAGACTCCGGTGGTCCTCTTGTCTTCACCACCGGTGGACAACGTGTTATTATCGG
TGTAACTCAGTTCGTCTCAAGTCAAGGTTGTCAGCGCGGATTACCGGCTGGGTTCGGCAG
AGTCACCGCCTACAACTCTTGGATCCAGGCTAGACTTTAAGCTATGAAACATGGTTTTTG
ATTTAACTGTTTTTTCTTAATAAATGCAGTAACGTTTTAAAAAAAAAAAAAAAAAAAACA
A
(901 bp)

- SilkBase 1999-2023 -