SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36510_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		unnamed_protein_product_[Heliconius_melpomene]
Ontology
GO:0000386 F second spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0030628 F pre-mRNA 3'-splice site binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.21 TPM:2.36
ORF EntryO_ErmoMG13325_3prime_partial:A_ErmoMG_comp36510_c0_seq2
Sequence
(Nucleotide)
GAAAAATACAAAGTGGTAAAATATCTATCTAGAAATGAATTGATACACAACTATTTTCGC
AATTGCATGACGATCTACGAAAAAGTTTAAAGAATGGCGACAACAAGTCGTGTGCCCATA
TCACAAATACTACGTAATAAAGATGATACTGAAGAAGATGATGAGCCCAAGAAGAAGTCC
AGGGAAGATTGGAGAAAAGCTAAAGAGTTAGAGGAGGCCAGAAAAGCTGGTACTGCACCA
GCAGCTGTTGATGAAACAGGCAAAGATATAAATCCACACATACCTCAGTACATTGCATCA
GCTCCATGGTACTATGGTACTTCCGGTCCCACTTTGAAACACCAACGTCCACAAGAGGAC
AGAGAAGCACAGTTTACTAAGCTTGACAGATATTACAATAAGGGAGTAGATGCCACAAAA
GTATCTACAAAATACCGAAAAGGAGCTTGTGAAAACTGTGGTGCGATGACACACAAGAAG
AAAGATTGCTTAGAAAGACCTAGGAAAACAGGAGCAAAATACACAAATGCTGGCATCTCT
GCCGATGAGTTTGCTCAGCCCGACTTGAACCTCAGCTACGATGGCAAGAGAGACAGGTGG
AATGGTTATGATCCTGAACAGCACAAGGCCATCATTGAGGAGTATCAGAAAGTGGAGGAA
GCCAAGCGGGAATTGAGGGCACAGAAACTTGAACAAGATCCCACAGCCAAAGATGAGGAG
GATAAGGAAGAGGAAGATGAGGACAAGTATGTGGATGAAGTGGACATGCCTGGTACAAAG
GTTGACTCGAAACAGCGTATCACAGTCCGTAACCTTCGTATCCGAGAAGACACCGCTAAA
TACTTGCGAAATTTGGATCCCAACTCCGCATACTATGATCCCAAGACTCGTTCTATGAGG
GACAACCCTACGCCTAATGTACCAGATTCGGAGTACAGCGGCGAGAACAGCGTCCGTGTG
TCCGGCGACACGGCGCAGCACGCCGCCGCGCAGCTGTTCGCGTGGGAGGCGCGCGCGCAC
GGACTGGACCTGCACCTGCTGGCCGAGCCCACCAAGCTGCAGATGTTGCAGGCGCACTAC
CGCCGCGACCAGCAGCGGTACAAGACGCAGGTGAAACAATCTATACTAGAAAAATACGGT
GGCGAAGAACATCTCCAAACTCTACCTCGAGAGTTATTGCTAGCACAAACGGAAGTGTTT
ACCCGATACAACAGAGATGGAACAT
(1225 bp)

- SilkBase 1999-2023 -