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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36467_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_15573_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005691 C U6atac snRNP
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0017070 F U6 snRNA binding
GO:0030098 P lymphocyte differentiation
GO:0031017 P exocrine pancreas development
GO:0042393 F histone binding
GO:0048538 P thymus development
GO:0071001 C U4/U6 snRNP
GO:1903586 P positive regulation of histone deubiquitination
Transcript
Level		FPKM:0.33 TPM:0.24
ORF EntryO_ErmoMG13178_complete:A_ErmoMG_comp36467_c0_seq1
Sequence
(Nucleotide)
CTTTTGTGAGTTTTATCTGTTACAATACTATATTACAGAAATACACACTATATTTATTGA
TCACTTTAGTGTGATAAACAATGGCGATAGTTGAAGATGAAATTCAGAATGGTTCTGAAG
GAGAAAATGAAATCGAAGTAGTAGTTGAAGAGGATGATGGTGAACAGGATCCAGATTCTG
AAGATGAAATATTGGAGGGAGATTTGCAGAGGAAAGTGGCTGAATATGAGCATAGAATCA
CATCACATCCCTTCAATTATGATGATCATATTGAATTAATCCAAGCTTTGTGGCGTCTGT
CAGAACTTGGTCGTTGGAGGACAGCATTTGAAAGACTATGGGAGATGTCTGTAATCAAAG
TTGATCATTGGTTGTTGTGGCTCCGAACAGAAGAGAACATTTCACAATCTGAAGAATTGA
TTGCCAATTTGTTTTTTAAAGCAACCTGTGATTGTTATTCTATGTCCATCTTATCGAGAT
GGACCTCATGGGCGCTTTCATTGGACGAGATACCTAAAATACGAGCACAGCTTGATGAAG
TATTACGCCGTGGAGGTTCTGACCCATATTCTGGAAAAGTATTGTGGGATTTAAAAATTG
ACTTTGAGAAATCACAATTAAACGAAACATGCAAGGAAGATTCAGCCTACAAAGAGCAAG
AAGATCGTGTATTACGTTGTTTGGAGGTTGTTGCTTCATTGCCTATAAATAGGAATCAAG
ACGCTTGGAATCTATTTGAAGATTTTGCTAAAAATATTCGTGAACAAGATTATATACAAA
AGGTGGAACAACAACACAAGGCAGCTGTGGATTTTTTAAAGCAAATTGTACCATATGAAA
TGAAAACAAAGACAACCCAATGTTACGTGGAGAATTACAAAATATACCTAGAGTATATTG
ATCTTGTGAAGCAGTTGTCAGTTGAGGAGAAGTATGCAGAGTGTGACAGTGATGGACTAC
TTAGGATTCTGTACGATCGTGCGACATACGAATGTCTCCTCAATCCGGACGTGTATGAAT
TATTGCTTGATTTCGCGAGACACACTCAGTTGACGTCGTCGCGTGCGAGCTACTGGCGGG
TACTGGAGCTTTGCACTCGACGCTGCCCTCAGAAACACACGTTCTGGACTCTGAAGATGC
AACAAGCGGAACATGAGGAGAAAGATTTTGATGAGGTCAAAGCTATATTCGAAACTGCAT
TGTCAAAGGGATTGGAATCTTATAAAGAGGCTGAAATGCTATGGCTGAGCTATCTCGAGT
ATGTGCGTCGGAATACGAAGTTCAGTGACGATGAACAAGTGGAAAGGTTACGGGGCACCT
TCAGGCTGGCTTGGGATTCTCTTGCAGAGACTTGGGCCGATGAAGCAAATGATTGCGAGA
TACCATTATATTGGGCAAGAATTGAATACAAATCCTTGGGATTCTCTTGCAGAGACTTGG
GCCGATGAAGCAAATGATTGCGAGATACCATTATATTGGGCAAGAATTGAATACAAATC
(1499 bp)

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