SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36425_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Zinc_finger_protein_on_ecdysone_puffs_[Papilio_xuthus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.95 TPM:5.12
ORF EntryO_ErmoMG13073_complete:A_ErmoMG_comp36425_c0_seq1
Sequence
(Nucleotide)
AAAAATGCGTCATCTATATTGCTCTTGGTGGGTTCTGCACGAGTTTTAATCGTGTTTGAT
GTAAACGTAAAGTTAATTTAGTTAATAAGCAAACAAAATTGATTATTAACCGGGCACTTA
ATATTAGGGGAACGATACAAAAGATCTAAGATACTGTCGAAGTGGTGTTGAATAGCTTTT
TATAAGATAATTTAATATCTGGCACGTCCTCTGGCTCTACCGCGGCCTCTGCCTCGGGGC
GAAGGCTTGGGTTTATCATTCAGGACCGGATTGATCAGTGGAGACTTCTCTTGTGGAGGC
TGTTCGGGTTCTTTCGTCACTACCGGTTCTTCAGCCACAGGAGCCGGTTCTTCTATTTGA
GCTGGTGGTTCATCAACCTTTTTTGTTACAGTTTCCGGTTCAATTTCCGGTTCCACTTCG
GTTGTGCCTACGTTGTTCTTCTCATCTTCAAGAATCTCATCAACTGACTGCTCCCAGTCT
TCGAGATCATCATTTGCGGGCATACTGTCATCCAATTGTGCATCATTACCATCATTAGTA
TTATCATTGTCATTATCTTGATCATTGTCATAATCTTGTCCCTCGTGGTCCGAGGATGCC
TTGCGCCTCTTCCAGTTTCCAGACTGATCGTTGCGTTCAGCCGGACGTTTTCCATTCGAA
TTCTCAACTGGCGGTGGCAATGCCTGTTTAACTCCAGTTTTCTCAGACAGCATCTTGATG
AAGTAGACATGGTGTCTCCAAGTCTTCAAGTGCACCTCAGCTGTCTCCTGAGTATCCAGG
AGTTTACGGCACAGTTTGCACTGCACACAGCGGAACTCGGACAGGAATGATTCACCAACG
CCTCGTTCCGTGCTGTAACTTGGGAACATTTCCGAAGTCACATGACTAAGGTCATCATCC
TCCTTGAAGTCCAGAATCACCTTCTCATCATCAACAGGATTATCATCAGTCTTCTCCTCG
TTGACATCCTTCATCTCTTGGTCATCATCCTCCAGTTTTGCCTTGGTTTCACCGTCTGTC
TGCTGTTCATCAGTTTTAATGTTAGTCTTCTCATCCTCATCACGGCGCGGCCTGCGTTGG
CGACGCTCGCACAAGTAAGATTGTTCCATGCTCAACGTCGAAATCATTAACATTTCCGGT
TTAGGCTTGGTCAGGACATCCTGTCTATCCTGGATAGCCATCAGATGCTCAGCGGTGAGC
CGGTGCTCGTCCAGCTCGATCCTGGTAGGCATCTCCTTGTGGCAAGTGTTGCAGAACGGA
TGTAGGTACTTCTTGAGCTTCCGGTGTCCGACCGTGGTGCGGTGCGCGGCTCCGTTACCC
GCGTACATGTCGCACATCGCGCAGTAGAAGTCGCGAGCCGGTTGCTGCCCGGTTTTGCGA
GTACGTTTCATCTCGCGGATCTTGTACTCTTGCCTCATGGTATCAGCAGTCAAAGCGTAA
CTCTCGACCGTCTTCTGCATCATTATAGCATGAGCCCGTCCGCTCAAGTGGTTCTCAAAC
GAGCGTCCATCCCACATGCTCTTATGGCAAATATGACACTTCAGCAACTTCGCATTGACA
TCATCGTAACGAGTCCTCTGGATTTCCCCTTTATTATCATCAGTAGTCTCCTTCTCTTCC
TCAGGTAATTCAGTTTCAGATGGTTTCTCTTCAGTTTCACTCTCCTTAACAGGCTTAGCC
TTAGAATCGGGTTCCTTTTTCGGGGAGTTCCTGTGTTGCCGTTGCCCATCATTGGGCCTG
AATGGTTTACGATTCATGTTGATACGCTCACCAGCGCGATTGTAATTTCCCGTACGCCGG
AAATTATGATTGCCCATCCTGTTGGGATCATACCCACGGTGGTCAAACCGACCCATATTG
GGCCCAAAGTCCCTTCTAATGGGCATATCTAGAAGCGAAGGCACAGCGTTCTGCCTCGGT
TGCAGCAAATTGATGATGTTACTGGCCAAAGCCAACGTGGCTTCGGTAGACCCTCCACCC
AGTGGTAGGAGGTTAGGAAGGCGCTCTCCCGGGCCCCCAGACTGCCACGGAGACACATTA
TTGCGCACGTAACTCTTTGAGCGGTCGTTTCTGGTGAAATCTGTACGGCGTCCCGGCTGC
GGTCTTCGGTTCGACATTATGAATTGAGTTTGAAGGTATCCGCCAAGTTTCCCAAAATTG
TACTTTAAATTAAGTAACACAATGGAAAAAATAGGTAGTTAGAGTGAAAACACAACACTT
AAAATCAAACACGAGGATAAAAAACGA
(2247 bp)

- SilkBase 1999-2023 -