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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36420_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_116_kDa_U5_small_nuclear_ribonucleoprotein_component_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006412 P translation
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:3.93 TPM:2.89
ORF EntryO_ErmoMG13066_3prime_partial:A_ErmoMG_comp36420_c0_seq2
Sequence
(Nucleotide)
TGCAATTGTACGTCTTGCCTTGCAAGCTCTAACAACATAGGATCGTCGAAAAACTTGTTG
ATCGAGACATCTTCACTGAGACCCTTGCGTCGACGTGTTTTGATCATAAATTCTCTCGCT
AAATGAGTTGCTGGTTGTGGTTCCAACGGCCTGATAATAATGCTCTTATCGAGCGGGTCT
CCGGGCACGATCTGCCAGTGATGGAACACTTGCAGACAAAAGGCCTGTCCCTGCGTGTGC
GTCCGGAGATCCGTCTCGAAGCCGAACGAGTCTATGGCCGGGACGAACGCCTTGATCGTG
TAGAGAGGCGAACCCGGGACTGGCGCGTCTTGAGTCACGTGACCTCTCCTTTTGGCGAGT
ACGGTGTACACAGCGGACACGCAATCCGCCGGCGCTTGTACTTCTACGAACAAGTACGGC
TCCATCAGACGAGGTGTGGCCATCAGGAATGCTGAATACGCCACCCGCCTCGCTGTGGGT
ATAATTTGACCACCTCCTCTGTGCAACGGCTCCCCCGCTATAACGGCATCTAATATCTTG
AACTTCACGTTTCTTATTGGTTCCTCGCACAGCGGACCTTCTCTGGTACCCCACTGGAAA
CCTTGTACTATACTATCCTTGACGGACGCTAGTAGATGTTTGTCCACTTCGGAGGGTAGA
GTATCGTCGACTAAAATATTAGGTCCCATCGTGTCGGGACCAAACGCCCAGATAGAACGA
GCTGCCAACAGATCCCAGTCGTATTTGGTTTGGAAAAATTCGCCGAGTCTCTTCCTGTCC
CACGTGACGCACACCGCGCCCGTCTCTATGTCCTCGGCCAGGCCTCGCTCCAGCGGCTCC
GCGATCATGGTCAGCTTGTTCCTCTTGTTGGGAGTCTCCGCGAAGCACTTCAGCGACGAC
GTCTCCACCACCGTCTCGCAGAACGACACCACCGGATCCGCGACTTTTATATCGATCTCA
GAGTACATGTTCCTGAGATCATGCATCACACAGTCCAAGTACAGTTCCCCAGTTCCCAGT
ATGACGTGTTCACCTGACTCTTCAACGCGAGTCGACAACAATGGATAAGACTTGTTAACC
TTTCTCAATCCGTCTAACATCTTCGGTAGCTCCGAAGGGTTGACAGGTTCGACAGCTATC
TTGACGACGGCCTGCGTGTTGAAGCGGAGCGGGGTGAAGGTGTGCAGCTCGCAGTCCTCG
TCCGCGGACACCACGGTGCACGTCTTCACTATGGGCTGGTCGATGCCTTCGATCAGAGCC
CAACAACCGGCCGGGACACGGTTCAGTTCCACCTTATATCTAGCTTCGTAGATCCACAGC
CTGCCCACATTCATCAGTCTGGAGTCCTCTTCGTCCTGGGAGCTGTAGTTCTCACCGAGG
ACTCGAACCGTCTGTCCGGCGTACAATGTTCCGCTCATCACACGAGCCAACACCAAAAAG
AAGCCGCAGTCATCTGTAGGATACATCTTGGTTGTGTGCGCGACAAGTCGTCCCGATTGA
TCGCAGTTCAACATGTCCTGGTGCAGCTCGCCCTCGGTCCCGCGGTAACAGTGCGCCACC
TTGCGACCCGCGGCGTCCAGCGGGGACGGGATGTGACGCACAGACATCTCAACGAAACCA
CAGAAATCTCCAAAGAAACGGCTGCAAACCAAACGGAGTAGTGGACGCACATTCAACTTT
GACTCTTGTTTTGTTAACTTTATACCGAGCTCTGTTAACACTGCTGGTAATGTGTCGTCA
ACATCTCCTACAACCTGTGCAAAAATCTTATAAAGCGGTTCCAAAATGAATTCCACGAAG
CTCCTCTGTGCCGATGCATGTGGTTGTTTCTTTGTGAATCGTCTAGTTTTCGCGTTGAAG
TATATATCACCCCACAGCCAGCCCGCCATTTCGCTGGCCCGTAGACCGGAGTCCGGGTAG
GATGCAGCGTACATCGCCGCAAACGATTCCAGAGAGAAACACACATCATAGAGGGTCGAA
GCAAAACACACGTTACCTAACAGAGGTGAGAATACAATAGGAGGTTCATCGGGATTATCC
TGAGGCTGATGTGTTTCCAACATGGAGTTCAGCTCATCAATAATGTGTCTCAGCTTATAA
TAAGCATCTGCAGGCGGTAGTTTCAGTTCTAGCATCAGTCTGTCTATTTTATTGATACAG
AGAGTAAGATGAACTCGTTCTTGTACGGCATGACGCAGCATTCGTTCCGTGTTGAGCATA
ATACCTTCAGCTGCATCAACAAATAGGACAGCACCGTCAGATATCCTCAAAGCAGCAGTA
ACTTCATCGCTAAAGTTCACGTGGCCCGGTGTATCCATAATGTTCAGTAAATGAGATTTT
CCCTTTATATCTTTTAGAAGTAATGTTACAGGCATTGACTTGATTGACACTCCCCGTTCT
TGTTCCACAAACAGTGTGTCCGTATACCTCATGGGGATTGTTGTTTCATTATTAATAGTC
CCAGGATGTGTCTGCCTCATGAGGCAATCTACGAAGGATGTTTTTCCATTATGCAAATGT
CCCATTAATGTTACATTTCTGATCAAGTTAGTGTTATCCAACATATCAGCCATATACTCC
ATGTCATAGTTGGTTTCCGGTAACTGCTGTTCTTGGACCTGGAACTTTTTGTTTTTGACT
GGCTCAATGAGAGGTTTGTCCAGGGCTTGGGTATCCTCTTCCTGAACCACCGTTTCAACG
TCCGGTCCATACACTTCTACAGCTTGAGGATAATAACGTTTGTCTTCATGAAGCACCACC
GACATAGGTGCCGCTTCGGGCTCCGCGTCGGCGTCCTCATCTTCCTCCATTGCCTCCTCA
TCACCATCACGATTATCCTGGCCGTACACACTCTGTTCGTCTTCCGAATCCGAATCTAAG
TCCGGCCCGATGTAATTACCGAATTCATCATATAAATCTCCATCCATTTTCAGTACTACT
ACTGTAGTATTTACAAATTATTTATAAAAACAAATCCAAAACAAACACGAATGTTTCGG
(2999 bp)

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