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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36328_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		short-chain_dehydrogenase_[Danaus_plexippus]
Ontology
GO:0001523 P retinoid metabolic process
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060342 C photoreceptor inner segment membrane
Transcript
Level		FPKM:12.62 TPM:9.29
ORF EntryO_ErmoMG12793_5prime_partial:A_ErmoMG_comp36328_c0_seq1
Sequence
(Nucleotide)
GCCACACACACTCGCTGTCTCCGATTCAGCAAATAAGATGTGGGTCCCAACTGCTCCTGT
AACCTTAATAACAGCAGTCGCTGCTGCAGCCGGCGGTGTCTGTCTATTCAAAGACTTCTA
CAGCGGTCCGCCTTACGATCGAACGGTCCAGGCTGATGACAAAACAATTATTATAACGGG
TGCGACCAGCGGTATGGGGAAGGCAGTAGCACGAGACTTCGCCAAACGAGGTGCTAAGGT
GTTCATGGCGTGTCGCGACATGATAAAATGCGAGGAGATCCGTCGCGACATCGTCCTGCA
GACGAGGAACAAGTACGTGTACTGTCGATCCTGTGACCTCGCCAGTACTAAGTCGATCAG
GGAATTCGCTGCCAGATTCAAGGCCGAAGAACCATATCTCCACGTATTGGTGAACAACGC
TGGAGTGATGGAACCCCCCAAGGGAGTCACTGCGGACGGCTTCGAGACCCAACTCGGTGT
CAATCATCTCGGCCACTTCCTCCTCACAAACTTACTGCTGGACACACTTAAAGCCTCAGC
GCCCAGTCGAGTGATAGTGGTATCGGGCAGTGCCCACCAGCGCGGTAAGATCCACAAACA
GGACCTCAACATGAGCGAGAAGTATGACGCGCCGGCCGCCTACAGTCAGAGCAAACTCGC
CAACTTACTGTTCGCAAGAGAACTCGGTAGGAGATTGCTTGGGACGGGTGTATCAGTAAT
AGCCATAGACCCAGGCCTCGTAGACACGAACATCACCCGCCACATGTCCATGATGAAGAG
CATAACGCGGTTCTTCATATACCCGCTGTTCTGGCCCTTCATGAAGACATCTGAGATCGG
AGGACAGACCATAGTCCACGCTGCGCTGGAACCTAAACTCCAGAAGTGCTCGGGTGATTA
TTTTGTTGACATGAAGGAAGCTGAACCATCTGAAGACGCGCAGAACTTTGAATTGGCGCA
GTGGCTGTGGAAAGTCAGCGAGAAATGGACCAAACTGGACGAACACATGGCGGCCATTAC
AAACTCGCAACGAGGGTAGAACACAATTAGGATTATATGAGACTAGTTAGAATTTATTGT
ATTTACTTTGAATAAGTATGTGTTTTAATTTTTAGTTCAATAAATGCATTTAAAATTGTT
AAAAAAAAA
(1149 bp)

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