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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36242_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		gag_pol_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.09 TPM:4.48
ORF EntryO_ErmoMG12503_3prime_partial:A_ErmoMG_comp36242_c0_seq1
Sequence
(Nucleotide)
GTGACAGACGCATCGAACGTGTCTATCGGAGCAGTTCTCCAGCAAAAAGTAGATGCAACT
TGGGAACCCCTAGCTTTTTATTCTAAGAAGATGAGCCCCACACAGCAAAACTATAGTGCC
TATGATCGCGAATTATTAGCGATCTATGAGTCGGTGAAACATTTCCGGCATATGTTGGAA
GGGCGACATTTTACTATCATCACAGATCATAAACCCTTGGTGTGTGCATTTCAACAGAGA
GACCAGAAAGGCTCACCAAGGCAGATTAATCAATTGTATTTCATTTCACAGTTTACCACA
GCTATCAAACATATCTCCGGGGTAGAAAATCAGGTAGCCGATGCACTGTCCCGGGTTGAA
GCAATATGTGAACCGGTAAACTACCAGGACTTAGCCTCATCACAGAAGGAAGACGTAGAA
CTACTGAACCTTCTCACAAAAGACACCGCACTCAGGTTGGAGCAAATTATTCACCCAGGT
ACGAATGTTCCAATTTATTGTGATGTTTCTTTGGGAAAACCTCGCCCATATATAACAGCA
GCCCATAGACGCAGGTTATTCGAGTCAGCACACTGTTTAAGCCACCCAGGAGCAAAGACA
ACCATTAAGTTGGTAAGCGATCGTGCAGTTTGGCCATCATTAAAGAAAGACATCCGACAA
TGGGTTAGAGAGTGTTTACCATGTCAGCAGTCAAAGATTAATAAACACACCGTATCTCCT
CTCGGGAACTTTGGTATACCCGATTGTCGATTTGCAGAGGTGCACCTAGATATCGTAGGA
CCACTCCCGATCTCTTCAGGGTATAGATACTGCCTAACAGCCATTGATAGATACACTAGG
TGGCCGGAAGTTATGCCTATAACAGACATAACTGCCGAGACAGTCGCAAAAACTTTCTTG
GCTGAGTGGATCTCACGGTATGGATGCCCCAAGAAAGTTGTAACAGACCAAGGCAAGCAA
TTTGAATCGCGATTATTTCAAAATTTAGGAAAATTATGTGGTATTAAACTAGCCAGAACT
ACGGCTTACCATCCTGCGTGCAATGGCATGATCGAGAGGTTTCATCGAACTTTGAAGACA
GCAATCATGACTCACGGCGATAAAGATTGGATTAAAACTCTTCCCATAGTACTACTCGGA
ATTCGAGCAGCATGGAAAGAAGACCTTCAATGTTCTCCTGCAGAGTTAGTCTTTGGAGAA
CAGTTACGCATACCAGGAGAATTTTTCATTTCCACTACTGGTAATACCGAGTATCCAGAC
TTCATTAGCAATTTACGCCAGAAAATTTCAATTCTTCGACTTACGCCAGCCTCTAACCAC
TCCTCACACAAAATTTTTGTCCACAAAAGTTTGCCGACAGCAACGCACGTATTTCTTCGC
CAAGATCTTTTGCGAGGGTCATTGGATCCACATTACTCTGGGCCACACAAAATTGTAGCC
CGAGATGCAAAAACAATGGACATTATAATAGGAAACACCGTTAAGAAAGTATCTATAGAC
AGACTAAAACCCGCGTTCATATGCAATGAACGACGAAACGAAGAATACTCACAGTCGAAG
TCAAAAGAAATACAGACACGAGATGTGCCACTTCAACCTACTCAACCAATTACACGTACT
ACAAGATCGGGACGAACTGTACGTTTTCCCGACCGTTATCTGTGAAACCTAGGGAGGTTT
CATACTCGGAAGGGGGTCATGTGGCGTCGTTTTAATTTAAAAACATTTGTGACGTCGAGC
GAACGCGGTCCGTAAAGTTTCCTTCCGCGATGCAGTGGTTCATACCTATTCGGAATTTGA
ATGCACTTCAGTGCGACACGATCAATTACGGCGAATGCACGCTCGACTTTTTCTTGCGAA
CCGTTGTAACGTTTTTACGAAAATAAATCTTTCACTTTCAACAAACGTATTATTTATTTT
AATACCAAACTATTACACGCGAAAAGTGGTGACCCCGACGTGATTAATAACGTATATTAT
AAAAGTTTGGACATTAAATAACTATAAAAACGGACTATAAGTTAATAACAAAGAAAGTGC
AAGGTGACAATAAAACGAAAATTAACGATGGAAGAATCTGGTACGAGTACCAAGACATCC
GAGCTTACCCAAGCTTTGGTGGCAGCATTGGAAGCCGCACATACGGATAAGGTCAGCGTC
AAGATACCCCCATTTTGGCCAGAAAAAGTGGTTGCCTGGTTTCAATTAATCGAAGCACAG
TTCGCTATCGCCTCAATAACGTCAGATACCACAAAATACTTCACGGTACTTGGCAACTTG
GATGTTAATGTGGTATCCGAAATCGAAGATTTAATTAGCAATCCACCCGCGACACATAAA
TATGATCGTTTAAAAAACGAATTAATTAAGCGATTGTCGGCCTCGCAGGAGAAGAAGGTG
CGTCAGCTACTGGTTCATGAAGAGTTAGGTGACCGAAAGCCCTCGGTGTTCCTTCGTCAT
CTACAGAGCCTCGCCGGACCGGGTGTACCAAGCGATTTTATACGTACAATTTGGACGAGC
CGACTACCGACCAACCTCCAAACTATCGTTGCGTCGCAAGCCGATACGACCTTGGAAGCG
GTTGCTGAACTGGCTGACCGGATCATGGAGATTGTC
(2616 bp)

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