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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36164_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:4.57 TPM:3.36
ORF EntryO_ErmoMG12244_complete:A_ErmoMG_comp36164_c0_seq4
Sequence
(Nucleotide)
AGTTCCCGACCGCGATCAACACGAACAAAATAACCGAACGCTTTCGAACGAACCTTAACT
ACAACCTTGCGTTACTGCGAATCTCAGGAGCATTGACCAATCGACAGCACATCACACGGT
GATCACCCTCCAGCAATCCTGAACTCTAGCCGCCTGCCGGATATACGAGCTATTTATAAA
ATTCCGCCGTTGTGAGAGAAATGAGACGTAATTTGTTGGTGGTTTTGCCAAGTTTGCACT
GAGATTTGCAGATCGCTTTGAAGATAGTGATAAATGCTGTACATAACGTGTAAATAAAAG
GATTCATTGCTGTAGTGAGAGATAGTGCGATTGAGCTATCTGGTGTTTACTGGATTTTGT
TTGAGCAAATTAATAAAAATGGTACGAGGACGTTATTCTACTTCTGATATAGGGGCATTG
GGTGTTGGCTATGCTAGCGTGGGTCTGCAACACTCCCGGTCGGCGGTGCTGCACGCTCAA
GTGCCGGCTCACTACCGGCCCGTGATGCCGCCTCATGCTCTCCTCAACAGCGCCTCCAGC
GGGAATGTGCCACATGCACAGGGCCCCCGCGTCCACTTCAAGCTTCAACCACAGACCATC
ATTCCTGAAAAGAAGAAGTCTCCTCCGTCGTCCCTGACCAATGGGAACGGAAAGAGTATT
CGCCTGCAGTCGTTTGCGCCGGGCTTGAAGCGATCCAAGTCTCTGACGTCAGCGGATGCG
TTGGCGAGCGGCATGGCGGCGCTGGGACTGGCGGCCGACGCGGGGGATCTGGGTACCTTC
CCGCCAGAAATACAGGAGTGTATCGATAAAGCACTTGAAGATCCGAACGCGGTGTGCGCC
CGCACGCTGATGGACGCGGTGGGTCACCTGGTGTCGCGCGCCGTGGAGTCGCCGCGGTAC
GCGCTGCCGGCCGCGCGCCGCTGCATCGCCGTCGTCGAGCGCGAGCAGACCGAGACCTTC
CTCGAGTCGCTGCTCAACACGTGCCAGCAGTGGTACCACGACCGGGACAAGTTGTTGGGC
GCCATGATCGGCGGCGGCCGTCCCCGGCTGATGGCGTTCCTGTCGTTCCTGCTGGAGATG
TACTGCCAGCTGCGGCGGCGAGCCATCCAGCGGCGCGGCGCCAGCGCACAGCCCGGACAC
GTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCCGGCAACCCGTGCCCTCC
GCCAGCGACACGGAGAATCTGTTCTTCGTGCTGACGTACATCGGCCGGGACCTGGAGTCG
CAGCTCCCCGGAGACCTGGAGCGCCTGCTGACGGCCGTGCGCGACGCCTTCCTCAACACG
GCCGCGGCGCCCTCCATCAGGCGCACCCTCCTCCAGCTCATAGAGCTGCACGCTTCCCGC
TGGCAGCTCCCAGGGTGCGCAGTCCTGTACTATTATCCTTCATCTAAATAATATCACGTG
AACGGTCTTGGGACACAATGACGATATCGTCCAATTCAAATATTGTCCAAGGGGCATCCC
TATCCATCTGACTGAGCTTTGCAGCTGAGCGGCCATTCCTTTGACGAAGGTGCGGGTACT
TTGAAACTGTAATTGCAGTTGCCACAAAGGTTATAATGAACGATCAAATTGTCAAATGTT
GTGTTTGTCAAACAATTTACATGTTTGATGATGTTTGCTTTATAAACGATTAAATTAATA
TATTTTACGTGTTTGTCAAATTATTTGATAGTTTGCAGCAACGTTTGCCGTGTTTGTCAA
ACAAAACAAATATTGATTTACTTGTATTTGAACATTGTCAACAAAAGTGGAGCAAAATAA
TTGATTTGTTGAGTTTGTCAAACAAGTTTGATCGTTGAAGGGGCACTTTACAGGCATTTG
TTATTGGTTTGGTACTGTTAGTGAAATGTACAGAAGATTCGTCCTCTGTTAGGCATGAAG
CCATAAGCTCATTATTGTGCCTTTAATGATTTTAGTAGATATTTAAAGCTTTAACATCAC
TTTGATTTAACAATGATAATTTAATAGAATTGAAAGTGGTGTAAAGTGGAGTATTTGTAA
GGTTTTGTTGTAGCTTAGGTGGATTAGAGAGTTATAGCCTCGGAAGTATTAAATGAGTAC
ATGTATTAGTTTGGACAAGTTGGCGATGTACACTACTGTACGATTCTCGCATAGTACTTT
GTGCATTGTATCCTTTGTCGTTTTCTAAGCTAGTTTTATATTGCCATCTATTATTAGCAC
TAAATATCTTATTGCTTGTTGTATTGTTTTCATAGGATACAATTATGTTTAGTTTTTAAG
TTACAATGCACTATTCCCAACATATTTAGTAGTACATTGCACTCCGGTATTTTTTTTTTA
CACATTTTAGTTTCGAAATTGTATTGAAAAGTTTGACTGAATTATTCGTGAAAGTGAAAC
TATCTCTTTTTTATGCTTGTGATATTATAAATTTAAGTATCTGATATCTTTTCTGTCCTA
ACCAAAGACTGTAATGAATGGGATATTTCATTTGAATTTTTATTAACAAAAAAACTTGAA
GCTGGACCAAATTTCTTGTTTCAAATTTATTGGCTAAAGTTATGCATGTTAGTCTATAGA
TGTTCATTATCTACGTAGTTTTAGATTGCTCTTAAAACTATCATATCAAATTAATGTAAA
TTATAAATATGGGAAAAATATATAAAAAGACCGTTGAATTTTCGTAATAATGCATTCTTA
GCGATTTAAGTTAAAAATATGTTTGTAAAAAAATCTAAAAACAAAAAAAAAATGGTGCTA
ACA
(2763 bp)

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