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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36164_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.22 TPM:2.37
ORF EntryO_ErmoMG12242_complete:A_ErmoMG_comp36164_c0_seq3
Sequence
(Nucleotide)
GCCCGTATTTATAAAGTTAGTAATTTCTATGTTGTAAATATTACGGATATAATACTAGTC
ATCGTTCTAGTGTATTTATTATAAAATTGTAACTAAAATTAAAAAAAAAACGAAATCCCC
GAGTGCAGTGGAGACCAAAGACAAGGGAATAAGTGTTTGGTAGCGAATAGCATAGTTGTC
AAGATGCAGACTCAAGTAGGATCAGGCAGTGACCTGCAGAGGAGCTATAGGATCCAGGAT
TTTGCGACTCCTGGGGTCATCATGAGGGAGCGGAGCTTCGTACGTCCACAGTCGCATCAC
AACATGCATCACAATCAGTTTTCGAATGCGAAACGGCGGAGCATGATCCTTACCAATGCA
AAAGGAAAACCAACCCTCGAAATCTATAGACCTCCAGGTGTCCGCACAGACGGCGTGGTG
TCGACGGCTGGTGCTGCCGGGACAACCAGCTCAGCGGCGAACAGCAGTGCTGCCAACAAG
CTGAATGTGCACGCGAAGGAGTTTACTATGGCGAAGCCTATTGACCTACATAACAGAGGG
GCATTGGGTGTTGGCTATGCTAGCGTGGGTCTGCAACACTCCCGGTCGGCGGTGCTGCAC
GCTCAAGTGCCGGCTCACTACCGGCCCGTGATGCCGCCTCATGCTCTCCTCAACAGCGCC
TCCAGCGGGAATGTGCCACATGCACAGGGCCCCCGCGTCCACTTCAAGCTTCAACCACAG
ACCATCATTCCTGAAAAGAAGAAGTCTCCTCCGTCGTCCCTGACCAATGGGAACGGAAAG
AGTATTCGCCTGCAGTCGTTTGCGCCGGGCTTGAAGCGATCCAAGTCTCTGACGTCAGCG
GATGCGTTGGCGAGCGGCATGGCGGCGCTGGGACTGGCGGCCGACGCGGGGGATCTGGGT
ACCTTCCCGCCAGAAATACAGGAGTGTATCGATAAAGCACTTGAAGATCCGAACGCGGTG
TGCGCCCGCACGCTGATGGACGCGGTGGGTCACCTGGTGTCGCGCGCCGTGGAGTCGCCG
CGGTACGCGCTGCCGGCCGCGCGCCGCTGCATCGCCGTCGTCGAGCGCGAGCAGACCGAG
ACCTTCCTCGAGTCGCTGCTCAACACGTGCCAGCAGTGGTACCACGACCGGGACAAGTTG
TTGGGCGCCATGATCGGCGGCGGCCGTCCCCGGCTGATGGCGTTCCTGTCGTTCCTGCTG
GAGATGTACTGCCAGCTGCGGCGGCGAGCCATCCAGCGGCGCGGCGCCAGCGCACAGCCC
GGACACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCCGGCAACCCGTG
CCCTCCGCCAGCGACACGGAGAATCTGTTCTTCGTGCTGACGTACATCGGCCGGGACCTG
GAGTCGCAGCTCCCCGGAGACCTGGAGCGCCTGCTGACGGCCGTGCGCGACGCCTTCCTC
AACACGGCCGCGGCGCCCTCCATCAGGCGCACCCTCCTCCAGCTCATAGAGCTGCACGCT
TCCCGCTGGCAGCTCCCAGGGTGCGCAGTCCTGTACTATTATCCTTCATCTAAATAATAT
CACGTGAACGGTCTTGGGACACAATGACGATATCGTCCAATTCAAATATTGTCCAAGGGG
CATCCCTATCCATCTGACTGAGCTTTGCAGCTGAGCGGCCATTCCTTTGACGAAGGTGCG
GGTACTTTGAAACTGTAATTGCAGTTGCCACAAAGGTTATAATGAACGATCAAATTGTCA
AATGTTGTGTTTGTCAAACAATTTACATGTTTGATGATGTTTGCTTTATAAACGATTAAA
TTAATATATTTTACGTGTTTGTCAAATTATTTGATAGTTTGCAGCAACGTTTGCCGTGTT
TGTCAAACAAAACAAATATTGATTTACTTGTATTTGAACATTGTCAACAAAAGTGGAGCA
AAATAATTGATTTGTTGAGTTTGTCAAACAAGTTTGATCGTTGAAGGGGCACTTTACAGG
CATTTGTTATTGGTTTGGTACTGTTAGTGAAATGTACAGAAGATTCGTCCTCTGTTAGGC
ATGAAGCCATAAGCTCATTATTGTGCCTTTAATGATTTTAGTAGATATTTAAAGCTTTAA
CATCACTTTGATTTAACAATGATAATTTAATAGAATTGAAAGTGGTGTAAAGTGGAGTAT
TTGTAAGGTTTTGTTGTAGCTTAGGTGGATTAGAGAGTTATAGCCTCGGAAGTATTAAAT
GAGTACATGTATTAGTTTGGACAAGTTGGCGATGTACACTACTGTACGATTCTCGCATAG
TACTTTGTGCATTGTATCCTTTGTCGTTTTCTAAGCTAGTTTTATATTGCCATCTATTAT
TAGCACTAAATATCTTATTGCTTGTTGTATTGTTTTCATAGGATACAATTATGTTTAGTT
TTTAAGTTACAATGCACTATTCCCAACATATTTAGTAGTACATTGCACTCCGGTATTTTT
TTTTTACACATTTTAGTTTCGAAATTGTATTGAAAAGTTTGACTGAATTATTCGTGAAAG
TGAAACTATCTCTTTTTTATGCTTGTGATATTATAAATTTAAGTATCTGATATCTTTTCT
GTCCTAACCAAAGACTGTAATGAATGGGATATTTCATTTGAATTTTTATTAACAAAAAAA
CTTGAAGCTGGACCAAATTTCTTGTTTCAAATTTATTGGCTAAAGTTATGCATGTTAGTC
TATAGATGTTCATTATCTACGTAGTTTTAGATTGCTCTTAAAACTATCATATCAAATTAA
TGTAAATTATAAATATGGGAAAAATATATAAAAAGACCGTTGAATTTTCGTAATAATGCA
TTCTTAGCGATTTAAGTTAAAAATATGTTTGTAAAAAAATCTAAAAACAAAAAAAAAATG
GTGCTAACA
(2889 bp)

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