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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36076_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		putative_Protein_SMG5_[Operophtera_brumata]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:2.83 TPM:2.08
ORF EntryO_ErmoMG11950_internal:A_ErmoMG_comp36076_c0_seq2
Sequence
(Nucleotide)
CTTAGAGATAGTGAAGAGGCATATTAGAACCATTTGATGTATGATATTAGAATTTAAGCA
AGACGGGGCAGTTGTTTCTTGCTCCAGAATAGATAAATAATCTTCATAGTTTTTGTTTAT
ATCTGGTAGTGCTGCTTCATTAAAATCCATACACATCTTCAATTGATGTGTAATTTTGCT
GCAGCGCTGAGGAATGGCTTCATCAGATTTATTTAAATACCATATTTCTATCAATGACAA
AAAATCTACAATTGTATTTTGTATATGTTCAACCTGAGTTACAGTATCAGGTTCACTTGC
TGTGGGATAAAACTGATCATTCTTCTCAAATATTTTTGTAAGATTACCCATAGCTCCTTC
AAATGGATTTTCACAATTGAGGCAGTGAATGTAGAAACTTGCAGAATCCAAATTATAGTT
TTTTTCAAGGTACAAATTTCCTAATTGATTGTAAGGCATTCCCAATGTAAAGTCAGTATG
AGCTGCTTGTAAATAGTATCGAGCAGCAATTGTTGGTTCAAAAGATGGTGATATCTCAAC
TGCATAACGGCTTAAATCTCCCAAGTAGATCAGACATGAGTGCAAAGCTGATTTGCCAAA
ATCTAACACTTCATTGTCACTAGAAATCACAGGCATTTCATCCTCTTCAATAGTGGGTAT
ATGATCCAAATCTTTGAAATCTAGTTTCATTTCGTAATAAATTCTATCTATGAAATGATG
AAAATTACCAATTCCACATTGGATGAGTGTGAACAGGAAATGGTCATTTTCATTGTTAGT
TCTTAACTTTTTAGCACTTGATATAGTGTCATAGTACACTTTCCTCCATAACAGTTCGAG
GGCTTTCTTGCCATAGTTTATTGGGTCTAAAAAGAGTAATTTCTCGCAATTGTCTCTCAT
CTTCTGCCTTTGGACTTCGATGTTAATAGTAAAGAGATCCGGTATAGCAAGACGTATCAA
TGAGATGTCATCGGCAACGAAAACTATACCGGATCTCT
(998 bp)

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