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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp36021_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_5'-3'_exoribonuclease_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000723 P telomere maintenance
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004534 F 5'-3' exoribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006396 P RNA processing
GO:0007126 P meiotic cell cycle
GO:0007569 P cell aging
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:3.11 TPM:2.29
ORF EntryO_ErmoMG11768_3prime_partial:A_ErmoMG_comp36021_c0_seq1
Sequence
(Nucleotide)
AAATAAATCAACTGAAATAAGGTTAACTGTTTTGAGTTTGTGATCGAAGAAGCTCTTAAA
AATGGGTGTCCCAAAATTTTTTCGTTACACCAGCGAGCGGTACCCCTGCCTCAATGAGTT
GGTGAAACAATATCAGATTCCTGATTTTGACAACATGTACTTAGATATGAATGGAATCAT
TCACAATTGCTCACACCCTGACGATTCGAATCCACATTTTCGTATAACAGAAGAAAAGAT
CTTTACTGATGTCTTCCACTATTTAAGTATCTTATTTCAAATTGTTAAGCCAAAGAAATT
GTTTTTTATGGCTATTGATGGAGTAGCACCCCGTGCTAAGATGAATCAACAGAGAGGTAG
AAGGTTCCGATCTGCCAGAGAAGCAGAGACTTTAGAAGAACTGGCCAAAGCGAAAGGTGA
GGTTCTGCCTACCGAAAAGAGGTTCGATAGCAACTGCATTACCCCAGGAACGGTTTTCAT
GGCACGTTTGCATGAACAGCTGAAATATTTTGTTAAGCATAAAATGACCACAGACCCTCT
TTGGTCTAAAGTTAAGGTCATACTTTCTGGCCATGAGACCCCAGGTGAAGGAGAACATAA
AATAATGGATTACATACGATGGGCCCGATCCCAGCCTGATTATGATCCTAATACAAGACA
TTGTCTCTATGGTCTTGATGCAGATCTCATAATGTTGGGTATGTGCACCCACGAACCACA
TTTTGCACTCTTGAGAGAAGAAGTTAAATTTGGCCGAACCACACAAAGAGTAACAAGTCC
GGAAGAAACAAACTTCTACCTACTTCATTTATCTCTATTAAGAGAATATTTAGAACAAGA
ATTCATGCCGATAAAGGACAATTTACCTTTTCCATATGATATAGAAAAAATTGTTGATGA
CTGGGTTCTTATGGGATTCCTTGTTGGAAATGACTTTATACCTAATCTTCCCAATATGCA
TGTCAACAACGATGCTCTGCCAATCTTGTATAAGACATACATGACTGTACTGCCTAAGTT
AGATGGTTACATAAATGAGTCGGGTGATCTGAACTTGGGAAGGTTCGAGATATTTATGCA
AGAACTTTCCAAAATTGATAGAGAAAAGTTCCAAGACACCTATACTGATTTGAAGTATTT
TGAAGAAAAAAACTGGGCGTCGATCGAATCATAATGAAAGAAAAGAGTACAAAGCAAATA
ATAATGATACATTCGACGTAGACGTTAATGAAATAAAAGGGCATGCTGATGATGATCTCC
AAGCACTCATTAACGCTACAGAGAACATGTTTATGGATGACATGGAAGATGGTGAAGATG
AATACGAAGAAACGAGCGATGAGGAGGCTAACATGGAAATGGAGTTTCTATTACACAAAA
AAGACTATTATATGACTAAGTTAGATTATTCGAAAGTTACAGAGGAAGTGTTAGCCGACC
AAGCAGAGTGCTACGTGCGAGCTATACAGTGGAATCTCCATTATTATTATAAAGGATGCC
CTTCGTGGTGTTGGTTCTATCCTCATCATTACGCACCTTATATATCGGATATTAAGGGCT
TTAAAGATTTAAAGATTGAATTCGAACATGGTGAACCGTTTAAACCTTTCGAACAGTTAT
TAGCAGTGTTACCGGCCGCCAGTAAACATTTATTGCCGAGTCCCTTCCACGATCTGATGA
CAGACGAAGACTCGCCGATAGTACATTATTATCCATTGCGTTTCGAGACCGATCTCAACG
GGAAAATCAATGATTGGGAAGCTGTTGTTCTTATACCATTTATTGATGAGACAAATCTAC
TATCTGCAATGGCTCCGTGCTACCAGAGGTTGACAGATGAAGAGCTTAAAAGAAACCAAC
ACGGTCCAATGCTTGTTTATAGCTGGAGTTCAACTAGTCAAGGTATCGCCAACGCCCCAC
AATATTTCCCGTCGATCCAAGAATGTCACGCGATTGAAAAACAAGTATGGAGGAATGAGA
TCAACGTACCCGAAGAAGAATTAAAGAAGGGAATGCTTCCCAACGCACGTCGGGACATGC
TGTTCCCTGGATTCCCGACTATGAGACATCTTAAGTATAAGTCGACATTGAAAATGGCCA
AAGTAAAAGTTTTTGACCTCCCCGCTCGTAACAGCAGTATCATAATAGAACTGATCAAAG
AAAGAGAAGAAAGCTCATTAGAGAGGGTTGCTAATGATCTACTGGGGAAAGTAGTGTGGG
TCGGGTGGCCACATCTCACCAGAGCTAAGGTCGTCTCCGTATCAAACGAAAAAATGCGTC
TACATCATGTCGATAAGCAGAACAATAATGTGAATGGGCTTCCTACTTTTACTACGGAAC
AGAATACTGGTAATTTGCATAAGCAATGGCTCGGAGAACAGAATACTATTATTGAACATA
ACATGAACAGACTTGGTATAGATTTAGGAGATGTCAATATTATAGTACATGCTGTTAATT
TGAAGGGTTACAAATACGTGGTGCAGGAGGGTTGTCGGATGGCGTACGAGCCGGAGTGGT
GCGCCGTGCCGTGCGGGTACGCTGTGCAGGCCGTGCTGCGTGACGTCACCGCGCACACGC
TGCAGGAGCCCACGCGCTACAGCACCATGCAGGAGGCGTACCCGGTCGGCGACACCGTCT
TCCTGCTCACACCCGGACAGTACTACGGATGTGCGGCCACTATTATAGACTCCACCCAAG
TCCGCAGCGGTCGCATCAAGGTGTCGGTGCGAGAGACTGTAGAGCCGTCTCTCTCGCACA
CCCCCGCGCCTCCGTACAAGACCAGTAACCACGCCGCTGCTATGTGCGGTATAACAGGTC
AAATGTTATCATGCATAACGGGATGTGTGTTCTTTGTGGAAGGAACGAGAGATGGAAGAC
CCACAGATAAACTCAACAAAAAGAACATTGGTCTCAATTTGAAATTTAATAAAAAGAATA
TGGAAGTGTCCGGCTACACGCGTCGTTGCACCGTAACGGGCGCGTGGCTGTACTCGGACC
GCTGCATACAGCTGGTGCGTGAGTACGCGCAGACCTTCCCGGAGCTCTTCGACAAGCTCT
CCTCCTCCTCCATGAGGGATGTGTTCTTCGAAAGTGATCTATGGCCTGGACATGTCGGTA
AGAAAAAGTATCAGGATATCCTAGACTGGATAAAAGATCAGCCATTCCGCAAGGCTTCCA
AACGGGAGTGTGGGTCTGAAGCACTGGAGCCCGAGGAGATGAAGGCGCTCGCTGACCACA
TCGATAAACAGATGCAGGAGCTCAATGCCAACGAGAGAAGAATAACGATGCAGGTCAAGT
GGAACCTGCTATATAAGCCGGAGCTGCACGAGGGCGAGGTGCCCCCGGACCAGGCGGCGG
ACTTCGCGCTGTACGACCGCGTGGTGTGCGTGGCGCGGCACTGCTCGGCGCCGGCGGGCG
CGCG
(3424 bp)

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