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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35837_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TATA-binding_protein-associated_factor_172_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:3.01 TPM:2.21
ORF EntryO_ErmoMG11297_5prime_partial:A_ErmoMG_comp35837_c0_seq1
Sequence
(Nucleotide)
TTATCACACAACCATTCGATAAAGTCATGACTGATGCCGAGTTGGAGAGCCTGGACGTGG
AGGGCGCGGAGGAGCTGATCTCGCGGCTGCAGGTGTTCGAGGCGGTGTGCGGACACGTGC
GCGGCGTGTCGCACGCACGTGTCGCCGCCGTCTGCTGCGGGTACACGCGTGCGCCCTACA
CCGCGCTGCGACACATGGCCGCACGTGCACTGGCCGCGCTCGCACGTGTCGCGCACACGC
ACGTCATGCACACCATCATCGAACAGTTGGTGCCCGCGTTGAACGAAGGCGACAGCGAGC
GCGTCCGCTGCGGCGCGGCCGAGGCGCTGGCGCGGCTCGTGGACGCGCTGCAGCTGCAGA
TAGTACCCTACATTGTACTGCTCGTCATACCCTTACTAGGCCGCATGAGCGACCACAGCG
AGTCGGTGCGCGCCATGTCCACGCGCTGCTTCGCGACGCTCATCCAGCTGATGCCGCTGG
AGGGCGCGGAGGAGCCGCGCGCGCTGGCCGCCGACCTGCGCCTGCGCATCCAGCGCGACC
GCGCCTTCCTCATGCAGCTCTTCAACCCCGCCTCCATCAAGGACTACAAGATACCGGTGC
CGCTGGCCGCAGAGCTCAGGTCTTACCAGCAGGCCGGCGTAAACTGGCTGAGGTTCCTGA
ACGAGTACAAGTTGCACGGAGTCCTGTGCGACGACATGGGGCTCGGCAAGACACTGCAGT
CCATCGTGGTGGTGGCCGGCTCGCACTGGGAGAGCAGCACCACTCGCACCAACACACTGC
CCTCCCTGGTCGTGTGTCCCCCCACACTCACCGGCCACTGGGTGTTCGAAGTGAACAAAT
TCATACCTTCAAAGATTTTGAAGCCCCTCCAATATGTGGGTCCGCCCGTCGAACGAGAAA
GACTTCGTCACCAAGTCAAGTACCATAACTTCATCGTCGCCTCCTACGATATCGTCAGGA
AGGATATAGATTTCTTCAGCAGTATAAGGTGGAATTATTGCATACTGGATGAAGGTCACG
TCATAAAAAATGGGAAGACGAAAGCATTTAAAGCTATTAAGTTGCTAAATGCGAATCATA
GATTGATATTGTCCGGGACTCCTATTCAGAACAACGTGCTGGAGTTGTGGTCGTTGTTCG
ACTTCCTGATGCCGGGACTACTGGGCACGTCTGGCGAGTTCACGGCGCGCTACTCCCGAC
CCATCCTCGCCTCCCGCGACCCGCGCGCCTCCCCTCTGCAGCTGCAGGCCGGCGCGCTCG
CCTGCGAGGCGCTGCACAGGCAGGTGTTGCCTTTCCTACTGAGACGCGTCAAGGAAGACG
TGCTGAAGGAGCTTCCACCAAAGATAACTCAGGACTACTACTGCGAGCTCAGCCCGCTAC
AGCGATGTCTGTACGAAGACTTCTCCAAGGACCACGTGCCGCAGGACATCACTAGTCATA
CACACGTGTTTCAGGCTCTACATTACCTTCAAAACGTGTGCAACCATCCGAAGCTCGTGC
TGACTTCGGACCATCCTGAGGCTCAGGCCATCGCGAAGCAACTCAGACAACAAAACTCCA
ATCTGGATGATATCGATCATTCTGCTAAACTGCCTGCTTTGAAACAACTCCTGCTGGACT
GCGGCATCGGCGGCGTCGGCAGCAACGGCGCGGAGTCGGAGTCGCTGCCGGTGGTGTCGC
AGCACCGCGCACTCATCTTCTGTCAGCTGAAGAAGATGCTGGACATCGTGGAGAAGGACC
TGCTGCTGCGGCACTTGCCGTCCGTCACGTACCTGCGGCTGGACGGGTCCGTGCCGCCGC
AGCACCGCCACGCCATCGTCACGAGGTTCAACACCGACGTCTCCATCGATCTGCTGCTGC
TCACTACAGCGGTGGGAGGTCTCGGGTTGAATCTGACCGGTGCGGACACTGTGATCTTCG
TGGAGCACGACTGGAACCCCATGAAGGATCTGCAGGCCATGGACCGAGCTCATCGCATCG
GTCAGAAGAAAGTGGTCAACGTGTACCGACTCATCACTAGGAATACACTTGAAGAGAAGA
TTATGGGCCTGCAAAAGTTCAAGCTGATGACCGCGAACACAGTTATAAGCAGCGACAACG
CCGCCATGGAGACCATGGGCACCGACCAGCTCCTCGATCTCTTCACCCTCAACCCTGGAG
CCCCCTCCGCGCAGCCATCCACCTCCAAGTCCGTCCTGGAGACTTTACCCGACCTCTGGG
ACGACAAGCAGTATGAAGAAGAATACGACATGACTAATTTCATAAAAGGATTACATAAAA
TGAACACATAACGTGCAACTAAATTGATTATATAAAGACAGCATTCAGATTTTAAATTGT
AAATGCAACGCTGGGTACTGTAGTAACCGGCTTTAAGTTCCAACTGTGCCTCGAAACGCT
TTTAAGGTTAATTGAACTTCACTTTTAAATCTACAAAATCGCCACGGTCTGATCTAAGCA
AAAATGTAAATGCATTCACGGTCACTGCCTCAAGCATCTAAGATGCACCTAGTTTATGAG
TTACAATTTAAATGGTTTGCTTTCAATTTGGGAGTATAATAGACTAAAGCGAATTATGGG
ATATAAATTTCATATCATGTATGTATTATAAATGATAAAATACAGCTTTTGCTACAGTTT
ACATACTTTAAGGTGAAATTAATTTTCCTTAAGATTCAACATACTACCAAATTGTATTGA
GCTGTTGGCAAAATAATAAATTGATAGCTTTAAGACTTTAATTAAAGTATTAAGAAACTT
CTTTCAACTGTAGAAAAACAAATTATATACCATAATAACACAAGAAAAACACATTGTGTT
TTGGAAATCAGATAAATTCGAAGTGTTACAAATACAGCCTAGTATTATTACCGTATTTTT
TGAGATTTCTTACTTTAGGAAGATGAGAATCAATAGTTTTTTGCTATATTGTATTTAGAT
ATATAAAACCAGTCATCCACAGTAAGTCAATTATATAAAATTGTTAATATTT
(2992 bp)

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