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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35830_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)		transformer_2_isoform_E_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000302 P response to reactive oxygen species
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0048026 P positive regulation of mRNA splicing, via spliceosome
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:2.66 TPM:1.96
ORF EntryO_ErmoMG11280_5prime_partial:A_ErmoMG_comp35830_c1_seq3
Sequence
(Nucleotide)
AGCCACAGTCACAGCCCGATGACGTCACGCCGCCGTCACCTTGGTGATAGAGTGCGACTT
TTGGAAAACCCGACACCCTCCCGCTGTCTCGGAGTCTTTGGTCTGAGTCTCTACACAACT
GAACAGCAGATAAACCACATTTTCTCCAAATATGGACCAGTTGACAAAACCCAAGTTGTT
ATTGATGCCAAGACTGGTCGTTCCCGAGGTTTTTGCTTCGTTTACTTTGAAGACATGGAA
GACGCTAAGATCGCGAAGAACGAATGCACTGGGATGGAGATTGATGGTCGTCGCATTCGC
GTCGATTATTCCATAACACAGCGTGCCCATACACCGACTCCAGGCATCTACATGGGCAAG
CCTACAATAAGCGGCAGAGGAGACAATGGATATGACAGGCGTCGTGACAGGGAAGGCAGC
GGCGGATACCGCGAGCGCGACTACTACCACCGCGGCTACCGACACCGCTCCCCCTCCCCG
CACTACCGCCGCAGTCGCCGCTACGAACGGGAACGCTCATACTCTCCACGTATTGAAACA
AGAAGTAAAGGATGAAGTTCCTTGAAACTAACTGTGTTGAAGTTTTGAAAATGTTTGCAT
TGAAAAAAGCCCTTTCGAAACGGCGGTCGAAAACCCGGACCGGCCGAGGGAAGTTCGCCG
CTTGTCGAAGCGAAAAGAATATGATCGGGTAACCCTCGCTTTGTAGGAAGCAATCAAGCT
TACAAGAACTTTGAAGAGAGAAGTTTCGCGCTAAATTATGATCATATTCTTTATCTTCCG
ACTATAAAAAAAAAACTAAACCGCGGAATTATCTAAAATTCGATGCATTTAAATTTTGGT
ATTTACATGTTACTTTTATGTATATGTATTTGGTTTATTTGAGTTTGACTTATCTATACA
ATAGTTAGATTTAGTAGTGACTTGTGACCGACTATGAATAAAACATTAAGTTTTGTAACG
TCG
(963 bp)

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