SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35722_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_L_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0010467 P gene expression
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0035770 C ribonucleoprotein granule
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045120 C pronucleus
GO:0070062 C extracellular exosome
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:1.33 TPM:0.98
ORF EntryO_ErmoMG10976_5prime_partial:A_ErmoMG_comp35722_c0_seq1
Sequence
(Nucleotide)
CTACAATACACAGGTGGACGGCCCCAACCTTACAATATGGATTATGGTAGTGGAGGGCCT
CCGCCTCCAGGGATGATGAAGGAACGACACGGTCCGCCCCCACCACATCATCCGCGCGAC
GGTCGCGGCTACGGACCAGAGGGTTATGGCGGCGAAGGGTTCGTTCCACCACCCCCGATG
CACCACCCCTCGATGGCACCACAGAATCAGGGCGGCCCACCGCAGCAAGGAGCTGTCATG
ATGGTATATGGACTAGACCCGCAGACTGCGAACGCTGACAGACTGTTCAATTTGTGCTGC
CTCTATGGAAACGTCGTACGGATAAAGTTCTTGAAGACCAAGGAAGGTACAGCCATGGTG
CAGATGGGTGACGGTGTGTCAGTGGAAAGATGTGTCCAGAACTTGAACAATGTCACAGTT
GGAGATTACACATTGACTTTGGCTTTCTCGAAACAAGCCTACTTATCGGAAGTGATGAAT
CCATATCCGCTTCCGGACAAGAGTCCCTCGTTCAAGGATTACGTCGGGAACAAGAATAAC
CGGTTCCTCACACCCGCCTCCATTCACAAGAACAGAATACAGCCACCTTCAAAGGTATTG
CATTTCTTCAACACGCCCCCCGATGTGTCGGATGACCAGCTTCTACAAGTATTCAAGGAT
TACGGAGTAACGCCGCCACATACCATCTCCAAATTTCCACTTAAAAGCGAGAGGTCGTCG
TCAGGTCTGATGGAGTTCCAGAACATATCGCAGTCTGTGATGGCGATCATGGCGTGTAAC
CATGCGACCATACAACACCCCGGTGCGAAATTCCCCTTCGTGATGAAGCTCTGTTTCTCC
TCGTCCCGACAAATCGGTCAGGGTAAGGGGAAGCCGGATCAGAGCCAGAGCCCGAACCAG
CGACCTCCGCTCAACAACGGCATTGAAGAACATGAATACTATTAACGTCGGAGGAGTTTA
CACACTCACACATATCAAGACGGAAGGCAACACACACACACACTGCTACACCACTACGAG
TTTCGGGGGGAAACGTTCCCCACGTTGCCTTTGCATAGATAACATAAACTTTCCGGCAGA
AAAAAAAACACAAGGCAAACATCTTTGATATATAATTCCTTATTTTTAGATTTTTTTTGT
GATTTAGATCACTCCTTATAAAGACATTAACCGTTAGTTTTTTTTGGTCTATGTTGTAAT
TATTTAGACACAAAATAACATGTTTATCATACTTTAATTACACATATTACATTTCCATAT
TTTTTCTTTTTTTTTTTCCTTTTTTG
(1286 bp)

- SilkBase 1999-2023 -