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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35636_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.24 TPM:2.38
ORF EntryO_ErmoMG10767_internal:A_ErmoMG_comp35636_c0_seq1
Sequence
(Nucleotide)
GATAGTAGAATCGCACAAAGAACTCCGTTGTCCAGAATGTCGGATCCTCGTCGAAGCGAA
AGTAGAGGAGCTCCCTCCGAACGTCCTCCTCATGAGGATACTCGAGGGCATGAGGAATTC
AGCTCCGAAGAAGGGAACTGGCATCGGGCAAAGGATCCGAGCTGGTCATTTGCAGGGACA
ACAGGGTACACAAACGACACGTGACGGTAAACAGTTACCGCCACACGCCAGAGCCATGTA
CGATTATATTTCCAAAGAACCTGGCGACCTTTCGTTCAAGAAAGGCGAAACGATACTGCT
GCAGAAAAAATTGGATGCCTTCTGGTTCCAAGGCGAATGCTCCGGAAGAACCGGGATTTT
CCCCATCACTTTTGTGCAAGTCGTTGTCCAGTTACCGGTCGCAACTGCGCTCTGCAAAGC
GTTGTACGACTTCCGAATGTCAGCTCCCGATGAGGAAGGATGCCTCGCTTTCGATAAAGG
AGCAATAATAACAGTTCACCGTCGCGTGGATGACAACTGGGCCGAAGGTAGAATCGAGAA
CAGAGTCGGAATATTTCCGATAGCGTTCGTCGAACTCAACCAGGCGGCCAGGCAGCTCAT
TAACTGCACACCCTTAAACCGTCCCGTACCACCGATACCCGAGCAGGCCAGAGCGGGACA
TTCCGACCACAGACATCATTCTCAGAATCCTCATCGCTACCAACCGATGTCAGTTTCAAC
TCCGGCAACATCGCAAGGCAACTACCAGAACATGGCAACAATGAGCCAATCCCACCCCAA
CTACCATCCGACGCCGATGCTACAAATACTGGGCACACACTCCGCCCTACTCAATACTCC
ACCTCGCAACATCATCGAACAACAAGCCAAGAACTCGCTAGATCTGATACATTTCAACAA
AGGCCACGGGACAGTGGGCTTGCAAAGTGTTTCTCGTATCTCTGACGTTAACTACGATAG
AATGCGCGTGAAATTTGACTATAACTCCACTCCGGTGCACAAAGTGGACTCTACGTATCA
GAACATCCGGGCTCCGGTCTCTAATACCCAGAGTTCGGACTCAAGCTCCAGTATGAACAC
TCCGTCAGCAGGAGCCAGTTCGAATACTACTCCTAATACGAGTTCAGATACCTCCTGCGA
GAGCAACGAGCCGAGTCTGCCGAGTTCACCTGACAATAATACTGAGAGACCAGCCGTGCC
TGAGACGGAAGAGCGTCGTGACGCATCACTTAATGCTTCAATGGGAGTTCTAAGTTTGAA
TGAGAGTTCAACTGCCACTAACACTTCGTTGAATGTCAGTCTGCCTCCCTCGGAGAGCCC
TAAATTGAATGCAAGTCAAAATGAGGATGCTGAGGAGACCAGAGATGCTCCGTCGTCCAG
CAAGTCGCGGTCGAGTGGTCCGGATTCCCTGCTGAACTTCGGTCTAGGGCTGCAGGCGGC
GCTGTCGCCCTCGCACGGACAGGACGGGAACTATTTGTTGAGGAACCACAGAGAACATAG
AGAGAAAAGGCATAGTCTAACACCGTCGACTCATCTGCAGAGTAATCATAATACGCTGAA
TAGACACTCTGCGGAGATCCTGGCGACGAGTCTGCTGGACCAGGCGCCGGAGTCCCGCAG
ACGGCGCCGCTCCCGCAGCAGCGAGCGGCCGCTCCCCGCGCACTACGTGGCGCTCTACCC
CTACAAGCCGCACAAACCTGACGAACTGGAACTCACTAAAGGAGTTGTGTACACGGTGAC
GGAGCGGTGCCGCGACGGCTGGTACAAGGGCTACTCCGAGCGCAGCCAGCGCGCCGGCGT
GTTCCCCGGGAACTACGTCGCGCCGCACAGAACCAAACACGATAAGAGTGCGTCAGGTGC
CGGCGGCCCTCCTCCGCCCCCCGACGCGCCGCCGCGGGCTCCCTCGCCCCTCGCCG
(1916 bp)

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