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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35558_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_white_apricot_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:6.02 TPM:4.43
ORF EntryO_ErmoMG10561_complete:A_ErmoMG_comp35558_c0_seq1
Sequence
(Nucleotide)
TGGATTTTTAGTTTTGCACTTTGTGGTTTTTTTGTTAATCAATTAAAGAAATTGAACCCA
AATCATAATAAAAATGTCGTCGAAATGGACTAGACGTCACAGTGAAGCCGGTATTTTAAG
AAAGAATGAAATCAAAGAGAAAAAGGAAGAGTTATTCGTGTTCGGCTACTCATGCAAACT
GTTCAGGGACGATGACAGAGCCTTGCTCATTGACCAAGGGAAACACCTCATTCCGTGGAT
GGGGGATGAAACGTTGAAAATCGACAGGTTCGATCTGTTTTTTACTATCAGACTGTTAAT
TGTGGTGCTAAAACCATAAAAAAAAACATTAATAATTTGTCAAAGTTTAATAAAATGTTG
GAAGAATTATAAGATTTTCGCAGAGGATGATGTGTGAAGCTTGCACCGGGACGTCACCGA
GCCGGGGGTGTGGGCTCGTCGCAGCGACCTCTAATGTTATGGTGACACTCTTCAGCGGTA
TGTATAAATTGGAACGGAATAATTGAGTATGTATAAAGCTGTTGTTTATCTTTATGTTTC
ACATGTGAATGATGTTATGGTATTCTTTAACAGGATAATATGTACAAGTGCAATAGTGAG
GGACTTCTAAAAATTAATGGTATATGGCAAATTGTCATTTTAAAATGTTTTTCCAAAATT
CTGTTTTTTTACATTTTAGTATTTCATCTCTTTCCAGAAACTTAAATGTCATTCAACATG
GGATATAACTTTGAAAATTTTAACAAATGTATACCGTTTCTAAGTTAACGATTTATTTGA
GGGTCTAACAATAAGGTAGCTCAAAAATTACCATTTTGTTTATGTGAACAGGTACGATGC
AAGAGGAGCCCTTCACGATATGTCGGCATTGGAAGCACCATCCGGAGGATACGACTGGCG
AGTGGAGCTGACTAAGACTGAGCTTGATGTAGAGCAACTTTGTGATGATGAACGTTACAG
AGCTCTTTACACTGATGAAGACGAAGAGGAGATGTATAAAGAAGAAGAATTGAAGCGTCT
TCATGCTGCGGGCTATGGTCAAGTGGGTTTCAACTATGAAACACTGGCCCCACCTAAACC
ACCCACAAAGCCAGTCGAAGTTGATGAACCCTTCGTGCCATCACCTACTCTCGAAACATT
GTTACCGGAAGATGTTGTTTTGCCCGAAACACAAAAACAGAATGCCATAATAGAAAAAAC
AGCTAACTTCATAGCAAGTCAAGGTGCACAGATGGAGATCCTCATCAAGGCTAAACAAAG
GGACAACCCACAGTTCCAGTTCCTAAATAAAGATTCACCATTACATCCATATTACAATGC
TCTCATCGCACTGGTCAAAGCAAACAAGTGGCCAGAGAAAAAGGCAGATTTCGTCGAAGA
AAGACCACTTGATAATGATGAGTACCTCCATCCAAGTTTGGCTTCAACAGTCATTGAATC
GGCACCATCAATACCGAGTATCCAGTACAAGCCGTCAGCGGACTGCGACTACACGTTGCT
GGTGTCGCGGCTTGTGGGCGGACCCTCGGAGGAGGCGTGTCCGGGCGAGGACCCGCCCCC
CGGCACCGAGCCCGCCGCGCCGCATCCGCACATCGCCAAGGAACCAGTCATGTATAACAT
CCAAGGAGTACCTGATCCAAGTTTACAAGCAGCACAGACGACGTACTACCAGCAATACGC
GGCCTACTACCACCAGTACATGGCGCAGGCGCAGGCGCAGGCAGAAGCTCAAGCTCGGGC
TGAGAAGGCCAGGGAAACAACCGTCACTAAATCCACTGGACTCAGTCTCATGAAGAACTA
CGATTCGGACTCTGGATCGGATGATTCTGATACAGATGACACTTCATCAACAGACAGCAA
AGACAAAATAATATTGACTCCGCCCGAAGACGTGCAAACGGTAATCGACAAAATGGCCGC
CTACGTCGCACGGAATGGCGACGAATTCGCTGACATCGTGCGTTCCAAAAACGATCCAAG
ATTCACATTTTTAGACCCCGATCACAACTACCATCCTTATTATAAAAGATTACTTCAGCA
AAAGAAAGGAATCGACATGAACGGTAAAAGAAAAGAGAAGAAAAGTTCTTTACCTGTATC
GTTTTCTATAAAAAAATTGAAAGAACCCGATCCGATATTACCTAAGCCGGCGTTACCTTA
CGAATCTAGTAGTGACGATGAAAATAGTGAAGATAAACATTCAGACAATTCACAACAAGT
TGAACCAAAAGAGATCACAAAGACTCAGCAATCAAACGTTTTGCCGCCAATACTTGTGTA
CAAGATGGATGGGTTGATCCACGATTTTCCTACAGTGAGAACGATAGAACCGGCTAAACC
CACCCAAGCTGTTTTAAAACCTATGCCAATTATCCACGAAATTAAAGAAATGGCTGTTGA
ACCACCGCGCTTCATTGAAAAACCAAAATTGGTCGTCCAAATTGCAGAGACTTTAAATTT
AAGAGAAGATATCCAAAAAACAGAAGATAATTTAGAACGCAAAAAGGAAAAGAAGAAGGA
TCGGAAAAAGGAATACAAGTCGAAATCTAGGAACAGAGAAAAGAGAAGTCCAGGAAGAGA
AAAACGAAGAAACAGAGATAGGGATCGTAAGAAGAGCGAGCCCGTGAAGGAAAATATTGA
GAATGAAGTTATATCACTGGAAGATAACGGCAGTGACTTGATCGATCTTACTGGTGACCA
ATCAGATAGTAAATTGGAGGGCTCGCCCGAGCACGACCGAGTGAAGCAGACGGACCGGCG
CCGCCGCGCCGCGGAGTTCCTGAAGAAGGTGGGCGTGGATCCCGGCGCTGATGTCCTGCC
CACCTCCTCGCTGGCTAGCGCCATGGTGGATACATTGGAGTCTTTGAAAAGGAAGAAAGC
GGAAGAAGAAGAGAAAAGAAGACGGAGAGAGAAGAGAAGACACAGAGATAAATATTACGA
CGATGAACTTGAAAGATCGCATCATAAAAGCAAAAGGAGGAGGCACAGGTCGTCTGAAGG
CGAGGAATCTGATAATGATGGATCTAAAAGGAAGAAGAGAAAAAAGGAAAAGAAACACAC
AACAAAAAATAAGAAAAGGAGAAGAAAAGACGAAGAAGATGAAAAAGAGCAACTTCCCAA
TATTGATTTAACGCAAACACTCAAAGAGCTCAGAACTAATTCTCCAACTAAAGACTTGGT
GCTTCAGAATCTAGAAGATATCACTCGTATGGACTGCGGACGAAACTCTTCCGACGAAGA
AGTTGCTAATAAAAAGAGAAAGAAAGAGAGAGAGTACAGCGAGGGAGAGTGGTCCAGCGA
TAGTGAAGAGGATTCCAAATCATCTGCAAGTCGAGATAATTAATTAACTCGTATTAATAA
CGGTGTCAACGCTTTAACCAGGTGGTTTTACGAAAGTTTTGAATACTGTAGAGTTTTCGT
GAATTACTTGGTACAATCTAAAATTGTTAAATAATTTGGTTGTAAATACGACTCTGGCAG
TTGTTAAGAGGTTTGTCTGGTCAAATTCAATTGAAATTCTAAAGTTTTAATTTCCCTGAT
TTCTATCTTAAACTATCTTGAAGAGTTAGTTTCATCCATCAGTGGCGTGCATAGAAGTGT
TGGTTAGGGTATGTATGCAGAATAATCAGGCAATCAAGGCCATAACGTTATTTCACGTTT
TCAAAGTCCTTTTACCACGTTTTACGTAAATAAATAAAGTATAGAAATAGGAAGTGTTTT
GTAATGAAATGCATTTAAAAATTATTTTTATTGCAACTTTTTAAGAGAATTCTAGATTTT
AGGGTATGCAATAGTTATTTCCCACTATGGACTGCACGCCACTGATCCAACAACGAAAAG
ATAACTAAAATATTTTTTGGATATGCGCCAATCTTAGGACATATTCACACGGAGAAAGCA
CCGTGGATAAGTCGATTTTTGTCCCCATTGTCCCTAGCTCGAGGATGCGTTGAAGTTTTA
GATTTTCCATTTGTTAAATATCTATTAATTTGGTGGTTTGCAAATGTAACAAGGTACAGG
AGGGCATGTTTTTTTTTGACAAGTTTCCATACCCTACGGTAATTCTGCAACTTGCTTTTA
TAACATACAGAAATTAATGTTTTTATTAATTCTCAGAAAATGTACTTACATACCAGAAAT
TAGTGCAATCGCATTGTGCCTTTATTCCAAACAATAGATTCCTGTTGAAAATATGATATT
ATAAATAATATTCAATAAGCACAAAATGAAAGTGAAAAAAACAAAAAAATACCTAGAATG
GTATAGACTACTTTTTTAATAATGTTAAATTACAACAAAATATCTTGTTTTAACTATAAT
ATTAAAAACTGGTATATTTTATTGTAAAATAATTTATTGAGAACAAAGAAGTTTACAAAA
CATTCAGTGTTGTATTAGGCGGTAGGCCATACCTGATCACACCATACGTAGAAGAGATTG
ATTTGATGTAAAAATAATTACTTGTTTGCAATTTATGAATGGAATCGTGTGTTTGAGGTT
GTAATATATGTTATTATTTTAAGATTCATCTGGACGATGTACAATAGAGAACTGTAAAAT
AAATTTAATTTGTATAAAAA
(4580 bp)

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