SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35532_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:1.85 TPM:1.36
ORF EntryO_ErmoMG10523_3prime_partial:A_ErmoMG_comp35532_c0_seq3
Sequence
(Nucleotide)
GCCCGCACGTGTGCCTAGCGTGCCTTCATCTCGAGCTTTAACTAAATACACGAAATAACT
CTATTACAACTACGAGTGAAACAATTACACGCGAACTATTATTTGTGTTTTTAAATTAAA
TGTACATGGACTGATATTGTGCCACATCACTAGTTCTACTTAAACGTAATGTATTATGAA
TAAATGACTTCAGTGTGCCACCAATTAAAGTTGTAATTGTATTATTTTCTACTTCTTCCG
TCGACAAATTGGATCTTATATGAAATCAACACGTATAACTAATTTTTATATGCTAACGGC
ACACGACACTGTTTTTGGATGGAATTTTAGGCGGTTAATTGAATATTTTAAATGAGACCT
GAAAATCTCGAAGTTCCCCTGTCCGTTCCTCGTGACGCCAAGAACAGTGTGTACGCCATG
AATGATCAGACTTTTCACACTCCCTCATTTGGCGACGAAGAATTTGATATTCCTTTAATT
CATGGACAGCATGCTCCGGGGTCAGCTGCCCAGCATACGCACATTCAGTATACGCAATTA
CACCACGCTGCACCGCAGGTAGGCATGATGAACCCAGCGCAGGATGGTTTGGCGCCACCA
GGAGGTGCACCTTCTTATCAGCAACCTCTTTACTTACAAGAACCACATACGCCCGTCACA
ACACACAGCGGAGCTGGTGCTCCAGCAGGGAATTACATGATTCAACAACAACCTGGAGGT
CAACAGCGGCTTTTGATAATGCAACCAGCCCAAGCTATGAGTGGTCCACCAACTCCAAGT
ACACCTACTCAACCATCAGGCCCAGTCTATGGCTCACCGCAAAGAGCATCACCACCTGGA
ACCACAAGTGATGACTCTGATGATAGTGTACCTTCACAGCATTCACAGTTGCCTGGTGAT
GCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGAGCCGGCAGCAACAAACTACGCTT
CATCAGATTGGTGTTGCAAACATGGCTGTTAAAAGAACGTCACCTGATCCTATGGATAGT
GGAATTACTCGTGGACAGATGCAGAAAAAACCAAAAGTTCAGAAAAAAAAGAAAAAACGT
GATCCAAATGAACCGCAAAAGCCAGTGTCAGCTTATGCCTTATTCTTCAGAGATACTCAA
GCTGCAATTAAGGGTCAGAACCCTAACGCCAGTTTTGGAGAAGTTTCTAAAATAGTAGCA
TCAATGTGGGATGGTTTAGATTCTGAACATAAAAGTGTTTATAAACAGAAGACCGAAATA
GCTAAAAAGGAATATCTAAAAGCTCTTGCAGCCTACAGAGCTAGTTTAGTATCAAAGGGA
GGAGAACAAGAAAATCAAGCCATGTACAACCACAGCAACAGTGGTAATGTTTGTGGAGGC
AACAATGGTCCCACATATGGTAACTACTACCAAGGGCAGCCTTATGGTAATGGTCACTCA
CCTCAGAACTATGTACAAAATACCACACCGCAAGGATACTCCCCGCAGAACTATCCCCCT
GGTCAGCCACAGGCTTCATATCCTGGCCAGCCTGCACAGCAGTATCCACCTAACTCTCAA
CAACCTCCCCAAAATTACCAAGGGAATATACCAATCGCCCCACAGACATACCAGAATGTA
CCTGCTCAGTCACCGCAGGGCTATCAAATAAGTTCCTCAACATCACCTCCTAATTGCCAA
CCAAACGTCGCCCAATCTCCTAGGAACTATCAACCCACACAATCACCAACAAATTACCCT
ACAAGTTCTTCAATGTCACCCCCTGGATACAGACAAGTGCAAGCACAGTCACCGCCAATG
GGATCAGTACATCCTGGCATGCAGTATCACCCTCAACAGCAAATGCAACCAGCACATACA
CAGATGCAACAGACACAAGTACACCAAGTCCAGTACCAGCAACAACAGCAATCTCAACAG
CAGCAACAGCAACAAATGCTGCAACAACAACAAAGTCAGCAGATTTTACAACAAAATCAA
CAGCCACAA
(1989 bp)

- SilkBase 1999-2023 -