SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp35360_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagenase-like_[Papilio_polytes]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level		FPKM:8.07 TPM:5.93
ORF EntryO_ErmoMG10133_5prime_partial:A_ErmoMG_comp35360_c0_seq1
Sequence
(Nucleotide)
TTTTTAATTATTAATATCTTATCTGTTTGCGTTGCAACTGGACCGTACGGTTATCACAAT
AGAGTTGGAATTAAAAAAGCAAAAGATGTCTTGAGAAGTGAATCAAATGGATTTTTGAGG
ATTGTTGGTGGAAGTCAGGTTACTTCGACAAGTATAATTGCTTATCAGGCTGGTATTATT
GTGACATTACCAAAAGATGAATCGATTTGTGGAGGTGCTGTCGTTTCCAGCACTAGGATA
CTAACTGCAGCACATTGTTGGTGGGACGGAGAGAGTCAGGCTACATCTTTCACAGTAGTC
CTTGGCTCTTTAACCATATTCTCTGGTGGAACAAGGATCACGACTAAAGATGTCGTGACT
CACTCGTCGTGGAATCCTCAAAACATAATCAATGATATTGCTGTCGTCAAAATCACGAGT
GTAACTCTGAGTAGTACTATCCAAGCTATTTCATTGCCAACTACAGCTAGCCAAGATTAT
TCTGGTTCAAGTGCTACTGCTTCGGGTTACGGCAAGAGAAGTGATTCTCAAACATCTTTC
CCGTCCACCACTTCGCTATACCAAGTCCAACTGAATGTAATCACAAACACAGAGTGTCAG
AAGAGTTTTAGTCTGAAGATTCAGGATAGTCATCTCTGTACGAGCGGACAGAATGGTAAA
GGAACTTGTGATGGGGATTCTGGAGGTCCATTGGCGCTGGTTGTCAGCAACGTTAATACT
TTGGTTGGCATCGTATCCTTCGGTCTGGGAGATGGTTGCCAGGTCGGCTACCCGTCTGTC
TTCACACGCGTGACGTCATACTTAACTTGGACAAAAAATAATTTGTAGTATCAAAATCTT
ATGTTTTTGTATTGATATGTGTACATAATAAAACAGTTCGA
(881 bp)

- SilkBase 1999-2023 -