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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp21098_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_poly(A)-specific_ribonuclease_PARN-like_domain-containing_protein_1_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:1.90 TPM:1.40
ORF EntryO_ErmoMG1767_internal:A_ErmoMG_comp21098_c0_seq1
Sequence
(Nucleotide)
TTTGATTCCAAATTCATATCACATGTTATGAGTAAGAAGCTTCTTCTCACAGAACTTTGG
AAATCAAATATGTTAAAAGATTTATATGAATTCTTCTCTGAGGGGAAATGTAAGAAACTT
GAAAAAGGAATTAATATGATACGACTCACAACACCATTTGATGTTAAACAAACTTATCAT
GAGGCTGGATGGGACTCTTATTGTTCAGGATATTGCTTCATAAGGCTGGGTCACTGGGCG
GCCGGTGAGAACCGTGGCAAGTACCACACGGTCGGTCCCAAGGAAAAACTGGCAGCGCTC
GAACCATACTGTAACAAAGTCAATGTTATAAGGGGCAGTATCTCCTATATGAATTTCGCA
GAAAACGATCCTCCACGGAGCAGGCCCGAATTGCTGCACGTCAAATGTTTGAAAGAGAGC
GTCATAAACATCGAAAAGGTGGCGTCATTGCTCGGGAGCTTCGGTTCGATCGACATAAAG
CCCTGCGGTAAGCG
(494 bp)

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