SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp20008_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		RNA_polymerase-associated_protein_CTR9-like_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
Transcript
Level		FPKM:3.25 TPM:2.39
ORF EntryO_ErmoMG1573_internal:A_ErmoMG_comp20008_c0_seq1
Sequence
(Nucleotide)
CACGGCTCGCAGCACCAGCGCGAGGTCGGCGCGGTCGTCCTTGAGCACGAGTGCGGCGCG
TCGTCGTAGGGTGAGCGCGGTGTTGTAGAGGAGGGCGGGGTCGTGCGGCGCGACGCGTCG
AGCCCGCAGTAGCGCGGCGCGTGCTGCGCGGGCGCGGCCGGCCAGTCCCTGTGCGCGCGC
GACCCAGGTGAGCCACTCCACGTCATGCTGCATTCGGAACTTGCGGATGCAGTTCTCGTA
CATCTGTATCGCATTGATGTACTGTTTTTGTTCAACGTAAATATGCGCGATATTCATCCA
TACATCAGGGAAATCGGCCGTCGCCTCGCGCACTTGAGCGAATATATCACGGGCTTCGTT
TACGCAACCCTTGTGTGCCAGCACGCACCCTATTCCATTAGCCGCCCAAATATTCTTGGG
ATCAGTTTTCAGTACTTGTTTGTACATAGTGAGGGCGCGTTCTTGATGTCTCTTTTCTCT
GTCTTTCTCTCGACACGGCTGATGCAGGGTTTGAAGCCATACATTACCAAGAGCAATAAG
TGAATAAGCATCGTTAGACGTCAAAG
(566 bp)

- SilkBase 1999-2023 -