SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19826_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		MyD88_[Antheraea_pernyi]
Ontology
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0008134 F transcription factor binding
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 P innate immune response
GO:0048471 C perinuclear region of cytoplasm
GO:0070976 F TIR domain binding
Transcript
Level		FPKM:4.86 TPM:3.57
ORF EntryO_ErmoMG1492_3prime_partial:A_ErmoMG_comp19826_c0_seq3
Sequence
(Nucleotide)
GTTTTGGTAAAATTTGTCAGATTTTGTCATCGAAGGATAAAATTGTGCTAAGAACAATGA
ATATGAATGTTTTTTTGAGATTTTGTTCATAAATCAATACTTTTACAAATAGTTTTTCCA
CTAAATGACCACCAAATGGGAGTGGAACGTAAATCGTGTAAATGAATAGTGCAAAATGAA
GTTGAAAATGGCGAGTGATTCGGATATACATAATATGCCACTGTCGATGATTCCATATAA
AACTAGACAAATGCTATCCTGTTTATTGAATAGCAAGAAAATATTTCCAAGCGACGGACC
AGAGAAACTCCCAAGGGACTGGCGAGGTCTGGCGTCTCTGGTTAGGATATCAACACAAGA
AGCTGATTCTATACAGCAATGCCGGGACAAGACTGATAAAGTACTGGAAATTTGGCAGAA
GAGCGGATCCCCGACAGTTGGCAACCTTTTGGAATATTTGCAGCGTTTAGACAGATTCGA
TGTGCATGATGATATTTTACATGACCTGCGACAATATCTAGGCAAAGGGGAACTTATAGA
TATAGACAGACCAATATGTAAATACGAAGATAGACAGGTTGCGGTCAGACATAATGAGTA
TGCGACAAGCGATGACGTTGAAGGATATGAACACCATTACGATGCATTTGTTTTGTATGC
AGACGAAGACAAAGATTTCATTGAGGAGATGCTCAGGAAACTCGGGGACATGTTTAATAT
ATGCACAAAAGATAAGTTACTTCCCGGACACTCGACAGAGTACGCGCCGATCGCGGAGCT
GATCTCCAAGCGGTGCCAGTACATCATTCTCGTGTTCTCTCCCGCATTCCTCATGAGTTC
GGCGAACGCCTTCTACAGGGACTATGCTCAGGCCGTCAGTATTGAATCGAGGAACCGCGA
CTTTAAACAAAAGTTAATACCAATAAAGTATAAAGAATGTGAATTGCCGTTGCACCTCAA
GTACTATCACTGCTTGAGGTATACAAACTCAACTACTTTCA
(1001 bp)

- SilkBase 1999-2023 -