SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19756_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		DEAD-box_helicase_Dbp80_[Operophtera_brumata]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:5.85 TPM:4.30
ORF EntryO_ErmoMG1466_complete:A_ErmoMG_comp19756_c0_seq1
Sequence
(Nucleotide)
TTCCTATTATGCGTATCAAGTTTACAAGCTGTAATGTAAAAAAAACTAGATCAATTTCCC
ACATTAAATGTGGTTATTGATTTATAATCTAAGCCCCAATTTTCTCGATTTCTTCTGCAT
CTTCAATATCCAATAGTTGAATTTTCTTTCCAAAATGTCCTTCAATAGTAGTACAAATAT
CCATAGCTTGTGGTGAATCTATAAGATTGATAGCAATACCAGCTTTGCCAAATCTTCCCG
TTCTCCCAATCCTGTGCAAATATGTTTCACAATCTGCTTTTCTGTTCATATCCATAGGCA
TATCAAAGTTAACAACTAATGTAACTTGTTCAACATCAATACCTCGAGACAAAACATTTG
TTGTGATCAATACTTTCTCAAGACCTGCCCTAAACCGATCAAGTACTGCAATTCTTTGTT
CAACAGTTAATTCACCTGAAAGAACTGCAACTGAGTGACCATCCTTTGACATTTTTTCTG
ACAGCCAACTAGCAGTCTTTCTTGTGTGACAAAAAATAATAGCTTGTCCGATAGTAATTA
CACCATAAATATTACAAATAGCTCTATATTTATCTTCTGCACTTTTACATTTTACATAGT
ATTGTTTAATATTATCTAATGATTCTTCTTCCCTCAATAATCTTATAATAATAGGATTAG
GAACAATTATCTCAGCAAATTCCATGACTGCCATATCATAAGTCGCAGAGAAAAACATCA
TTTGACATGTTGATGGCAATAATTTATGAATCCGAATACATTGATCTTGATGCCCCTGTC
GGTTAATCATCACATCTGCTTCATCTAACACAAATACCTTAATTTTACCCATGTCAAACA
TACCAAACTTGACACCCCAATCAAACATTTTACCTGGAGTACCTATAAGAATATGATCAG
TGAGCTTTGTACCCTTAGGGACTTCCTCTCCTCTCACAGCATATTTTAATTTAATTTCAG
GACAGAATTTTGCCATTTTTGCAGCAACTTCCCCTGTTTGGATAGCAAGTTCATATGTTG
GGCTAAGACACAATACTTGTGGATAGTTCTTAGAAGAATCAACTCTGCTTAACATCGCTA
AAACAAAAGCAGCAGTTTTTCCTGTTCCCGACTGTGATTGTGCAATCATGTTTTGTGGGG
GATCAGCTAAGAGTGTAGGAAGTGCTGTTTCTTGAATTTTGGAAGGTGCATTAAAACCCA
TTGCATAAACTCCTTTCAATAAATTTGGCTTCAAATGCAAAGCTTCAAAAGTTTTCACAG
AATATAATGGAGAGTTAGGATCCTTTCTCTGGATTTCAATATCAAGTTTAGACTCTACAA
GTCCTTGTCGTATGATTTTCATTAAAAGAGATGTGTCTGCAGCATTTTCTGTATCTGGAG
CATCATCCAAACCTGTTATCTGGTTGTGATCTTTATTCAAACCCAAACCTGCAACTTTAT
TTGAAATCTCCAACTCTTCTGCCTTTTGACCCCACTGAGCCATGTTTATAGACTATCAAG
AAAATGAGGTTCAAAAATAAAAACTCCACAATGTCCACAACTCAAATCAAATTAAACAGT
CAACTCAAAACTCTCAG
(1577 bp)

- SilkBase 1999-2023 -