SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19594_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_9_[Amyelois_transitella]
Ontology
GO:0000124 C SAGA complex
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0043966 P histone H3 acetylation
GO:0046982 F protein heterodimerization activity
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0090575 C RNA polymerase II transcription regulator complex
Transcript
Level		FPKM:2.72 TPM:2.00
ORF EntryO_ErmoMG1433_complete:A_ErmoMG_comp19594_c0_seq2
Sequence
(Nucleotide)
CGGAGCCCGTGTTTTTGTTGTTTCCTAAATAAATTGAAAGTTTATTAATATACAATACAT
TATATTTGGTTTATTACTCTTAAACAATTTGCAACAACCTTTAAAAAATCAGCAAACATG
TCGGAGAAAGAAAAAAAATCGGGCGCTCAAACAAAACACATTCCGAAAGACGCTCAAGTC
ATCATGTCTATTATGAAAGAAGTAGGAATCACAGATTACGAGCCGAGGGTCGTGAACCAG
CTCCTGGAGTTCACCTATCGCTACGTAACATCAGTGCTAGACGACGCCAGGATATTCGCA
AACCACGCGAAGAAGAAAACCATTGACCTGGACGACGTCAGATTATCAGCACAGATGCAG
CTAGACAAGTCATTCACCAGCCCTCCGCCGCGGGAGGTCTTGTTGGAAATCGCAAGGGTC
AAGAACGTCAATCCACTGCCTTTAATAAAGCCACACTGTGGATTGAGGTTGCCACCAGAT
CGTTACTGCCTATCATCCTGTAATTACAAACTAAAACCAGCCACAAAGAAAGCAATAACA
AAAACCACAGTAACTCCTTCACCATCATTGAAAACTGTGTCTGTAAACAAAACATCTCAG
CAAACAGTGGTTATGAAGAGACCACCCGGAGCGATAGTGAACGTGGGAACACCTAAGACA
AACATTGCACAGAAACCTGTGCTGAAATTTACATCCGGGAGTAAAGTTGTGAAACCAGCA
GTAAGAGTAACCGCTGGTCCTTCGTCGCAGCCGGTTAAAATGGAAACAGATGAGCCGGTG
AGCCACAAAAGAAAGAGAGAAGATGATGATTATGACATGTAAATAGTAAAATATTTGAAG
TTACGTATTATGCTGTAAAATTAAGTCTAAAAGTAATCTTGTTTTCTATTACCTTAACAT
CTAAGACCTAACTCAGGACTCCTTTAAGAACTAGGTTAAAAAAAAACTTATTTTTACTTT
AAGAGGATTCTTCCCTGAAGATGACCTTCTTTATTTTACAGTATAATAAATATTTATAAG
CATTAATATTAATTTGTATTTCGAATAAGCAAG
(1053 bp)

- SilkBase 1999-2023 -