SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19549_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_BRCA1-A_complex_subunit_BRE-like_[Plutella_xylostella]
Ontology
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070552 C BRISC complex
Transcript
Level		FPKM:3.04 TPM:2.24
ORF EntryO_ErmoMG1395_5prime_partial:A_ErmoMG_comp19549_c0_seq1
Sequence
(Nucleotide)
TTAAAATTATAGAAGTGTATTTTTTATTTATTTTTCTAAGACAAGTCAGTCGTCGCTGTT
ACTACCGCTAGATAATATTGTCTTACATTCATTTTTGAATAATTCCACTTGTTGTTCAAC
ATATTCTTCAAAGTTATTTAGTGGGCAAGAAGTGAGAACTTTGTACCTTGGTTTCCCTTT
ATCGCTATGATAAATTGACCTTAATGTTAGAATTGGAGATTTTTCTGGAAATTGTCCCAT
TTCTATAATTAAAATCCAGTGGAAGTCGTTGATTTCAAATAGAAATGCAGCACTATTTAT
ATCATGTTCTAATACTGCACCTTCATATTTAACAACCAAAAATGCTAGAAGATCTCTTTT
CAATTTTTCGTTCATGAGTACATCTTTAATCTTTCTGTTTAATAGGTCAGTTACCATAGG
CACATAATCCATTAGAACAGTAGTTGGGTGCATTTGTGGTAAAGTAATGTTTCCTAATGC
TTTGCCAAGTGTAGGTGATAGAATCAATTCTGCATTTGTTGAATTTGGATACCTCACTAA
TAACAAAGCTGTGTCAATGCCAGGATTTTCTTCAATACCATCAGTGTATAATTCTAATAA
TCTTCCCACATCAACATTAAGTTTAATCAAAAATTCCACAACATGGGGTCCAACTAAAAC
TTCTATGTTGTTTTCTGAAATCAATGAGTCACCAAGTAAAGCACTGTATTCAAAAAATGC
TCTTGATGAATCATCATCACTTAGCTTTTTTATCTGATAATTTTTGTATAAATCTACTAA
TTCGAATATGACATTACTCAAAGCCCTCGGGTCATTTTCATTCCATTTAGCAAGACTTGG
CACTTTCTCTTCTAAAAAATGTTCATCTTCACTGACAAGAAAACTTTCATCATCAAATCT
AAAGTCTGGAGCAAACCAGGGTGTAGACAGATCAAACAGTATTTCCCACTTCAACTTTTT
TGAACAATAAGGCAACAGCAGACGGAATTGACTCTCTTCTCCGTCTGCTAAACAGGATAT
TCTTTCAACATCTATTTTAGTTTTACATAGACCAAGTTTTAATTCCTCGCACAGAGTCTG
GACGTAAGGTCGAAACGCTGGTGATAAATTTTTAAAATATCCAACTGTTTCCGTGCCCAT
GATCACTAGCACGTATTTTAGCACTTTCCTTGCAAATAAGTTTAGTAATTGAAATTCAGT
GGTAATAGGAGAGAAAACTATTATAAAGCTGAATTTAGTTAAAA
(1244 bp)

- SilkBase 1999-2023 -