SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19113_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RING-box_protein_2_[Papilio_polytes]
Ontology
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0019788 F NEDD8 transferase activity
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031466 C Cul5-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0051775 P response to redox state
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
Transcript
Level		FPKM:5.62 TPM:4.13
ORF EntryO_ErmoMG1181_complete:A_ErmoMG_comp19113_c0_seq1
Sequence
(Nucleotide)
TGAATTCTGAATCTCAGCTGTTTTTGTTTGTTATAAAATAAACAATTTATATTTGTGTGT
AAAAGATATCTCAATTCCATTAAAAATTACATACAGCATGTCTGGTGAAGATTGTGAAGC
TATGGAGCGTGGTGATACCGATGGGCAGAAATCTGATAAAATGTTTACTCTGAAGAAGTG
GAATGCTGTTGCGATGTGGAGTTGGGATGTTGAATGTGATACCTGTGCTATTTGTCGTGT
CCAAGTGATGGATGCATGTCTTCGATGTCAAGGTGAAAGCAAGAAAGATTCGTATGGGAA
ACAGGATTGCGTAGTAGTTTGGGGCGAATGTAACCACAGCTTCCACTTCTGCTGCATGTC
CCTCTGGGTGAAACAGAATAACAGATGTCCGCTTTGTCAGCAAGAATGGTCCATACAGCG
GATGGGAAAATAATGCACATCATAAATCAAATTAAACTAGATCTTTAATAACG
(473 bp)

- SilkBase 1999-2023 -