SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp19013_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_synaptobrevin-1-like_[Plutella_xylostella]
Ontology
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031201 C SNARE complex
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0045202 C synapse
Transcript
Level		FPKM:38.33 TPM:28.21
ORF EntryO_ErmoMG1121_complete:A_ErmoMG_comp19013_c0_seq1
Sequence
(Nucleotide)
GCCATATTTACACTATTTACAAAAAATCGTCACCTGTGTCTAATACGAACTTCTGAACTT
TTTAATTTCATTTTGTCTACTTTTTAAAAGGTAAATCCAGAAATTGTAAACAATGGAGGA
CCAAGGAGGAAGTTCTGCGCCTAGAGTAAGCGATAAACGCTTAGCGCAAACCCAAGCCAA
AGTTGACGAAGTTGTTGGCATAATGCGTGTCAATGTAGAAAAAGTTTTGGAAAGAGATCA
AAAACTGTCGGAACTGGATAATCGTGCAGATGCACTGCAACATGGAGCTGCACAATTTGA
ACAGCAAGCTGGAAAACTTAAGCGCAAATATTGGTGGCAGAATTTAAAGATGATGTTAAT
CATTGGTGCTATCGGAGCGGTATTGCTTATTATCATTATTGTGTGGGCAACTTCCGGCTC
ATCTAGCTCTCCGGCTCCAACTCCGACAACTGAAGCACCTAAAGATGTAAGCCCATAGTT
AATCATTGTAAGCACAAAATATAAAGTATTTAATTTGATTAATTGGGAGTGGGGTTCACA
AATGACCAAGCGTGACTGAACAAATGATAAATTATTCCTTTTGCCAGACGCACACTATTT
CTACATGAGATTTACATATAATCTTTAAAATATTTAAGGGCCAATTCAATTTGAACTGAA
TTCAATTTGAACCGTTAGAATAATTTATACTGTATTTACAAATCTTAAACTAGACTATAC
AATATACATTTTTAAGATTTTTACTATAAAAAGTATATATTGTGATTTTTCTTGTAGCTT
TTGATATTTAATAGTGGCCAACAATATACATAAAAAAATATTTTGTGATAAATAGCATTA
ACGTAAGAACGAAATTAAATTATTAATGTAAAAGAATTGACTAACTGATATTTAGTGAAA
TGTAAAATAATATTGAAGTAATTTGTCTACAGTCTTCAATACAATACAGAGCTTAAGATG
AAATGTAGCACAATTAAAGAAAACTCCCTAATTTCTGAATATTGGGGAGTTATGCGTTTT
AACGGATGAGTATCGTAATTTTAATTTAGTTAAAAACTAATGTGTAAAATATTGCTTGTG
TACCTAACATTTGATTATTGCTATGTTATTTTTATGTTTAAGTATGCACATATAGTTTTA
CTGAATTCACATAATCACTAAACTATGGTTTTATGATGCCGAATAACATCAAATGCATCT
GATGTGTTATTAACAGTTGGGACCAATTACTGAAACAAGTTAACTGTGTACATGTCTAAG
CCATATTACGAATTATTAATGCTTTTCAAATCCAGACTGACAAATCAGTTTCTTAATTAT
AGTGCAGTCCATTATCATTGTATGACAGTGAAAAATGTTAATGTTGTATACTAAATCTTT
AAATGTGAAACACTTATCTTAGTTATTTTATATTGTATAGTTGTAATAAAATGTGTATTT
CTTCAAAAAA
(1450 bp)

- SilkBase 1999-2023 -