SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp18968_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagenase-like_[Papilio_xuthus]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level		FPKM:613.87 TPM:451.68
ORF EntryO_ErmoMG1107_5prime_partial:A_ErmoMG_comp18968_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTAATTGTTGACTATAGTTCTTTTATTAACCGCTTAGTCCTAT
TTCAGAAAATAAATAAAACACTACCACAAGCTTTAAAACTATTAGAAACATAATTACTAC
AGAATCAAATTGTTAAACAAAAACTGTTTTATTGCGTCTTGATAAGGAATATATTTTAAT
CTTAACTTATAACAATATCTTGCACACTCCAGTCAAACTTAATGTTGGTGATCTCTTCCA
ACCAGTAGTGGTAATGTTCTGGTCTCACGAAACCGGAAGGATTGGGAGTGTTGCATCCAC
GTGCAGAGCCGAAGTTGGTGATGCCCACCAGAGTAGGAGAGCCGTCCAGGTCATCTATCG
TCAAAGGACCACCGCTGTCACCCGTGCAAATATTCTGTGAAGTGTCGTTATAGTATCGAG
CGCATAATGTCTGTTCCTTGATCGTTTGACTGTTAGGATACCACACGAGGCACTCCTCAT
TCGTGATACCAAGCTGGTATACCCAACTTAGTACCTCAGGGATGTATCCACCTAACCAAA
TATCATTGTTCCTTCCGAAGCCGCTGGTGGTCAATTTGAGGCCATCGTAGTTGAAGTTTT
GCCTTTCACTGCTCTGAATGCGGAGGGGTTGAATGTTTGGTCCGTACTCCACTTTGTGAG
GCAATCTCAAGAGGGCGATCTCGTCTACTTGCACGGCAGTCGAGGCGACATTGTAGCCAG
GGTGGATGTAAGTATCCGTAGTCTCCATTATGTACTCAGTACGGGTCAGGTTGGTCAAAC
CAAGTCGAACAACAAACGATACACGTCTGGCCACACAGTGGGCTGCTGACAGGATCCAGT
CGTTGTGAATGATGGAGCCACCACATGCACTGACTCCACCGACAGGAGTTACCGTGCGTA
TGCTAGCCTTGTAAGGGAATTGACCTTCGGTTGCGAACCATCCTCCTACGATACGACTTT
GTGCGCCGCTAGGAATATCCGCAATGTGGACTTGTTCTGAAGGTACAATTTCATCTTCTG
TTTCTACAGGAATACCCTGTGAACCACCAAAAAACACTAAAACAATCAAAAACTGCCACA
TTTTTAATTGAGTAACTGATTTTAGATTCCGACTTTGTGCGCCG
(1124 bp)

- SilkBase 1999-2023 -