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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp155835_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		sex-lethal_isoform_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007131 P reciprocal meiotic recombination
GO:0007224 P smoothened signaling pathway
GO:0007281 P germ cell development
GO:0007446 P imaginal disc growth
GO:0007530 P sex determination
GO:0007541 P sex determination, primary response to X:A ratio
GO:0007548 P sex differentiation
GO:0007549 P dosage compensation
GO:0008083 F growth factor activity
GO:0008187 F poly-pyrimidine tract binding
GO:0008266 F poly(U) RNA binding
GO:0009994 P oocyte differentiation
GO:0017148 P negative regulation of translation
GO:0018993 P somatic sex determination
GO:0019099 P female germ-line sex determination
GO:0019101 P female somatic sex determination
GO:0030154 P cell differentiation
GO:0030237 P female sex determination
GO:0043234 C protein-containing complex
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0048027 F mRNA 5'-UTR binding
GO:0048477 P oogenesis
Transcript
Level		FPKM:2.89 TPM:2.13
ORF EntryO_ErmoMG22952_3prime_partial:A_ErmoMG_comp155835_c0_seq1
Sequence
(Nucleotide)
AAAGGTACTAACTTGGAAGGAAAAAAATGTTGTAAATATTTTGCTCAATAAGTATAGAGG
TTAGTTAACAACCAAGGCATAAAATTTGAGAAAATATTTTTTTTAAACGTTTGTGATGTG
TGAACGTTACCCTGGATACTTGTTTGGTGGCACTCCTGTCAGTAGCTGGGACAGGAGTTT
CAATTCATTGGAAAATCAAATCCAGCAGCAGTACAGAGGGAGAAGTGGAGCAAACGCTCG
ATACTGGGGCAGCATGTCTGAAGGAGGTGGGCTCTCGGCCGCTGGTGGCGACACTGGCAA
AACTAATCTAATCGTCAACTACCTACCGCAGAACATAACAGAGAAGGATCTATACGCGAT
GTTCGTTACCATAGGACCCATCGAGAGCTGCAGAGTTATGAAGGATTTTAAGACTGGCTA
CAGTTACGGATTCGGTTTTGTGAACTACACCAGAGAGGAGGACGCTGCTAGGGCTATTGA
TACTTTCAACGGATACCAGGTCCGAAATAAACGGCTAAAGGTGTCATATGCGAGACCATC
AGGGGATGATATTAAAGAAACTAATCTGTACGTAACGAATCTACCTCGTGGCATAACCGA
TGATCAGCTGGAGACGATATTCGGCAAATACGGGAGGATAGTACAGAAACATATACTGAG
GGACAAGAACAGTGGCTCGCCGAGAGGAGTCGCATTTGTTAGGTACGACAAAAGGGAAGA
AGCGCAAGAGGCCATAGCCGCCTTAAACAACGTGATACCGGAAGGAGGGACCGAAGCGCT
CAGTGTGAAAGTAGCAGAGGAACACGGTAAACAAAAAGCTGCCTACTACGCTGGATGGAG
CGCGGGCTTCCAACAAAATAGAGGTGACTACTCGTGGAATTGCAACAATTACCCGCCACC
CGAAGCGTGGGACAATTTCCCTCCGCCTCCACTGATGGACAGTATTCCTAATAGCCCTAA
GAATGGATGTCGGCCGACTATGTGTAACAGACAAACATACCCAGTGCCCGGGAAAGTAT
(1019 bp)

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