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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp119017_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_SAP_domain-containing_ribonucleoprotein_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000346 C transcription export complex
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:7.99 TPM:5.88
ORF EntryO_ErmoMG22809_complete:A_ErmoMG_comp119017_c0_seq1
Sequence
(Nucleotide)
TTTTTATTGTTTTTCTTATTATAATGTAAATCTTAGACTATTTACTCTTAAAACACAGTT
TACTATATCTACAACTTATAAATTAGGCACCAAATTTGGCTTTCCGTTTTTCCAACTTCT
CCTTCAATTCAATATCGGTCATAATTTTGGAAACAGATTCACCGAACCTCTCTGCTCTTT
TTTTGAGCTTATCTATATTCTCAGTCAATGTACCAGTGCCACTAAAAGCAATTGAATTTG
AATTTTGATTGAATCTTTGTTTCCTGGCTTCCTTCCTCTCTGTGTCAGACATTTTGATAG
GCAAACCAAATCTTTTAGCACGTAGTTCTAACCTTTTCTTTGGATCCAGATCAGTATTGA
TTTTGATGACATTACTCTCGGATATAGATTTTTGTTCGACAGACTCCAATTTTTCCTCAA
TTAGCTCTTCTGTTGGATTGGTACTAACAAGTGAAATATTGGTAGCTCTATTCAATACAA
TTTTCTTAGCACTTGCATCTTTTTCTGCACTTTTATCTTTAGTTTCTGTAGTGATTTTAC
GTTTCAAAATTCGTGGCGGTTTTGTTTCTACAGTGGGCGCTGGAACAGGCGGTTGATCTG
CGAGAACCAAATCCTCATTCAAAGTGTCAACTGCACCGTCGTCAAGTACGTCAGTTTGGC
TTTTTACTTCTTCATCTTCAAATACTCCGTCAGAATCCATTTCGTCAAATTCAAAGTTAA
TATCATTATGTTCGTCTTGAGCCAGAGCCGCTTGTAATCTGCTTACTAACTCTGCTTTAT
CTCCAGCATGTGAGAGTCCGCGGGATTTCAATTCTTTTCGTAATTCAACTACTTTCATTT
TATTTACGTCAATAACCGTAGAATCTGCCATCATGTACTCGGAATTTATAAAAATAATAA
TTAACTCTAGTAATTCTATTTTCAACCAAAAACACAATTATTTTTAGTCAAAGAATTGAG
AATACAGATAAAGATACGGATGTCGG
(986 bp)

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