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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4830_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:27.81 TPM:27.97
ORF EntryO_BomoSK1998_complete:A_BomoSK_comp4830_c0_seq1
Sequence
(Nucleotide)
TTTATTAATATTTTCGTTGTTTATCATTAATTCAGGAACACTATGTTTCATTAATCATGC
AAATTGAATCACATACATAAATGAAATATCAAATACATTTTAACTTTTAACATTTGTATA
TTAATTTATTACAAAGAAAGCAAAGAAATACAAAGAACAAACAAATAAATGCTATACATT
TAAGATTCACACTGGAACGAATACACTGTTAAAAATTATACCAAACATTGTAACAATGTT
AAATCAATGATGGATGTATTTTGAAACAAACTAATGGATTTTCTAATGAGTTTCAATGAT
ATTTTAAATTACCAGGTAACATACATTGTATTCATTTCTAAGACAAATATAAATTATTAT
TGCTTTAGTTGCAAAGGCATACCTTAAGGCAAAAAGTTAAGCGTTGTATGTCAGTATGAC
AATATGTATACTTGACGTAATATAAAACTCTTTTAATGACAGAGGCAGTGCACACATTTG
TGCCTCTGGTAAACTTAAATTATCATTGACGAAAATAATAATTTATACCTTACTTTTTTA
TTTACTAAATAAATAATACCTAATTTTGTTATTTTTGTTAAATCTCTTACATTTTCAAAC
AGTCTAACAAGCCAATACGTATTTGGTTGTATATATCAATGACTCTGAAATCATAGCCTC
TCATATAAATATAAATAACCAAGATCTTTGGGCGGATTCTCTGAGAGAGCAACCTTATTG
TCGTTGAATATGACCCATCTTCCTTCATGGAGTATGTGACACACATAATGACCAACCATT
GTAGAAGTGCCCATATGGGATATAAATGCTATCAGTTTGTATTTTTCTGGTCCGTCCCTA
CATCCAAGTGTCCTGTCAGGTCCCGGGGTGGGTTCATCCAGGTCGAGTTGATCAGCGCGA
CTGAAGATCCAGTCAAGCGCTCGTGTGACGTCACCGCCCGTGGCCCCAAGCGCGCGGACT
ACCTGAGCCCGAGTGAATCCCATACTCATTATCTGCTCCACGCTTGCTTCATCAACGTTG
GCACCCACGGCCGCATCCGAAGGCTTAGTCCCAGGCGGTTCAAACTTATGTTCAAAGTCC
CAATCGGTCATGTGTTCCATGAGCCAGTTGGATGCGGCTTCGATACCAGAGTTGTTGGTG
TAGTACAAAGATTTCTTGCACGCTTCCACCGGGAACCCCATGTCGAGCAGTTGTGACAGT
AATACTTCATCGTATGTAGGAGCTGGGGTGTCAGGGGATGCCTCGGGCAGCTGCTTCTCG
TCAGGCTGCAACCCTCGTCCACGGAGGCTGCTTAGATCCACCTCCCAAGGCATGTCGACA
GCCACGTCAAGTTTTGCAGGGGTCCAATCTTCTTTGATAGTAAACTTTTTAAGTTGTATC
AGGAGGTAGTCAGGAAACGTCGCTAGTCGAGTTATTTTATGTGCGGTGACTTTCTTGTTT
AAGGCACTACTGAAGAACTGCTCAATTGTCTCCTCCCTCATGAAACTCTCCAAGCAAGCT
TTAAACGGAATGTGTGGCCTCACCACCAGGGCCGGGTCTAATCTCTGACCACTGGCTTCG
GCCTGGGCCCGTCTGGCCTCGTACTGCTGGACCTGCTCCACGTTGGTAGCAGCGGAGAGG
GGCACGGGCAGCGGCAGATGATGTTCGGCTCTCGTGGTGTACCTCACGCAGTTCGACTCC
GAGCACTTGATGCGCTCCTCCACTGCGAACTTCAAGCAGTCCGCAGGGTTCGGCTTGTGG
CGGCTGTTTCGCTGTAGGAGCGTCAAGAGATGCAAGTAGAACTCGTGCGCGTCCTGCTGC
CGCTTGGTGGCGAACTCCGGGTGGTGCTTCCCGACGAGCTGCCGGTACATGTGCGGGCTC
ACCCCCAGCTGGCCCCCCTCGGGGTCCGGGGTCGAGTACCGGCCCGACAGCAGACCCACG
CCCAGCTTTGCGGTTTGAACATTAAAATCGTTGACCGGATCTTCGGGGAAGGTGGCGAAT
ATCTCCGGAGCCCCCTCCACGTAGCGACGCACGAAGTCGGGCATTCGGAACATCACCTGT
ACGACGCTGTTGATGTAACAAGAGTTTCCCAAGTTGTTGAGTCCAGTGAGAGCGGGCCCG
TGCAGTGGTCTTAGATCACTTCCAGATTCTTGCAAGGTATTCCATTCTCCCGAACGCTGG
TTCAGCTCGAGCTCTAATTCCACCATAGATTTATCTGTCTTCTGCAGCTGCTGTACATTA
ATCCCAAAGTGTTTGAGGTGATCAGCGAGAAATGGGTCTTCCACCATATCATCTTCAGCG
TACGAAAAAACATCTCCTTTTCCTTCAGCGGTAATGGTTCCCAGCTTGACAGCGAGTGGA
TAGCCTGTCTCTCTGTAGTGTTCTACAGCATGATCATTCCCTCCGGTGCCATCGAAGAAG
CGACGTCCGCAAAGTATGGACCCATCAGTCAGGTTCAACCAGAGGTTATTAGTCAGGTCA
CACTTCTCACATTTCCATCCAGATGGAGGTATACGGATACCATTGTCCAGCTGCTTGAGG
TTAACAGAGTGTACAGAAACTTCACGTTTTTCACCATCCCAGGTGCCTTGTAATGCTGCC
AATTCTGCGATTTTGAATGGTGATTCTGCATCGATAACAGCTTGAACTGATTTCTTTACA
GGTTCTGGTAAATTAGGATCAGGCCATGGGAATGTGTGAAATCCTGGTAGCACCACCACA
CTGTAATGATCAGTGTATGTAAATTTAGGTTTTCCACATTCAGGATCAAAGCCTCCCTCA
ACTCCTATGGCGAGCCTGGTGATCTTCTTCTCGGGACCATCGCCTGTTTGCTCTGGTTCA
GGGATTGGTTGTTTCTCTCTTCTGATATGTAAGAAGACGGCGTTTCCGGTTTTCTGGAAA
TACTGTTCAACGTAATTGCGCCCGAATCCCAAGAATGACACCAGGGACACATAGAGACCC
GTCTCGGATTCCGGGTTGTCAAAAGAATATACACATTCGTCTTTGTACACAAGCTGATGC
GGTCCTGGCAATTTAATTTTAGACAAATGAGACGTTAATAAGCTTAACGATGCCATATCG
ATAACGGTGCTTTAAGGATTCTATCAATAGCTAGAGAAATTTAATTTTTTTGTTAAAACT
TCTAATATTTAACCTGACACGGCGTCGCACTAAAAATACCTTCTTTACATTAAAGGCCTG
G
(3181 bp)

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