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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4695_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_sodium-_and_chloride-dependent_glycine_transporter_1_[Amyelois_transitella]
Ontology
GO:0005328 F neurotransmitter:sodium symporter activity
GO:0005332 F gamma-aminobutyric acid:sodium symporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007612 P learning
GO:0009636 P response to toxic substance
GO:0009744 P response to sucrose
GO:0009986 C cell surface
GO:0010033 P response to organic substance
GO:0010243 P response to organonitrogen compound
GO:0010288 P response to lead ion
GO:0014054 P positive regulation of gamma-aminobutyric acid secretion
GO:0014070 P response to organic cyclic compound
GO:0014074 P response to purine-containing compound
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0032229 P negative regulation of synaptic transmission, GABAergic
GO:0032355 P response to estradiol
GO:0042220 P response to cocaine
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051260 P protein homooligomerization
GO:0051592 P response to calcium ion
GO:0051939 P gamma-aminobutyric acid import
GO:0055085 P transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:4.22 TPM:4.24
ORF EntryO_BomoSK1880_3prime_partial:A_BomoSK_comp4695_c0_seq1
Sequence
(Nucleotide)
TTTGTAATTTGTTCAGTGTCTGATTCTGATGCTTCGTAGTGTAGTGTTTTGTACCTATAA
TTCTCAATAAGTTCGTGTTGAGTTAATTAGTGCTATAGTTGAAAAAACATCACAATTATA
AATAACATAACTAGAATAGTTAAATTATTTCAAAATTTGAGTTATGTCTGAGTTTAATAT
GGAAATATATTAACGATTATAACGCAAGACACGAGACAGCTGACAGTTCGATGGCTGATA
CACACAAAAGTTAGGCAACCCAGGGCTTTCATCGCAACGCAGCGGCTATGACTTAGGCCA
TGCGATAAAAATGGAAGTTGTTAACACAGATGAAGGGCGCTATGAACAAACTGAAAATTT
ACCAGGGAACAGTGCGGCCGATAGCGACGCTTCGAGTAGTGTTTTCGAAGGCAACGATAG
CGATCGGTGTAGTGAGGACTTTGACGGGATTTCAGATGACGGCGATCTAAGGGAAGACCT
GCAGAAATCCATCGCAGAATGTTACAGGTCCGACTCGAATTTTTCATCTCAAGCAACAAG
CGACATCACAAATGACGAAGAATTTCAGGCGACTGCGCTCGTCCAGTTCATGGATATACT
GAATGACCTGGACGAAGTTCTAGACAAGTCTCTCTTGGCATGTTTAGACGACGACACAGC
AAACTACGACAGCGACGAAAACGATCTTATTTGTAAAATTAAAGAATGTATCGGGGATAC
TCAAGATCAGTCGGAACATTCCGAAGCATTAAGTTCAATGGACGAAAATACTCAAGTAAT
CACTTGTACAAACTACGCACCCTCTGTACCTTCGATAGAAGATTTAGATATAACGCAAGG
TGTATCGCAACGACCGCAAACTACAGGCTTGGGAAGATCGAAAAGCTACTCAGATGTGTC
AGCCCGTGATGTCGTTTCAAGCGTGGAGAGAGCCAGCACTACAAATGACAATGTGCGTAA
TTCAATGAGGAGATTAGATCCGATTGTTTTACCGGCGATAACAACAGAACAGCCTTTGAC
GTTGCCGGTTATATTGTTCTTGGAACATAATGTTAATATGCGCCCGACAAGCGTACCGAT
ACAGCTTCAGGTGACGGCTGCTAATCTGAGCACTGACGGAGCATCAGGACCGCTGATCGT
CGGGCGGCGTACTCTACTCATGAATCGGGCCCTCTCGTTGCCTTCTCCGGGCGACAGTGA
AGCCGCAGCCGGAGAGTGGACGGGTCGAAACACTGCCAGGAGTACAGCAAGAAGCAGCAC
CACATCGAGCTCGTCAAACGAATCGTTAAATGTTGCTGTGGTCAATCAAAGTGCCAACAA
TGGTACGGAGGAGAGAAACGAAGAGACTGAAGAACCTCCTTTTGGAGTTTGGCCTCATCG
TATGAGTTCGATGTTGGCCTGTTTGAGTTGTACTGTTGGTATTTTCAACATTTCTAGATT
TGCCATATTCAGCGTTCATTTTGGAGCGAGTTTTATAATACAGTTTTTAATACTGTCTCT
GTTTGTTGGAATACCCCTTTTTACACTTTACTTATGTTTGGGTCAAGTATTGGAAGCTGG
GCCAGTGGATATGTGGAGGATCTCGCCAATATTCCAAGGTGTTGGTATATCATTGCTCAT
CACCCAAGCCGTAATTGGAATGTACAGCATAATTGGTCTTTCTTGGATATTCGTGTACTT
TCGAGATTCATTCATTAATTCTAACGACAAATACAAATGGGCGCTGCCGCATGAATTCAA
TATCGAAGATCCCGCGAGCCGAAACGGTACATACAAAATTCACGAGACGATACCACAATA
TTTTCACGGCGAGGTCCTACAAAGAAATCTGCTTTCTAACGGCAATACGTATTTCGGAAC
GATTAAGTTTCAAGTTGCGTTCAATTTGGCCGTGGTGTGGATGATCGTTTTCGTCGCGCT
GAGCAAAGGACTGCGATCGTACGGCAAGGCCGTTTACATATTAATATTTCTGCCGATATG
CGGAACCCTTGTGCTGTGCACGAAACTGTTGACGCTGATACCGTACGACACCGTCACGAA
TATATTCGCCGAGACCGAATGGACGGAGTTCTTCGTGAACAGTAACAGTTGGGCGGCGGC
GGCACAGGAGACATTCCTAACGTGGGGCTTGCTAGGGGCCTGCGTGATGCAACTGACGTC
CCACAAGAACGCAAAGAACAAAACCAGTGGTATGCTGCAGAGGGAGAGCGCCTGCATCAT
AGCATTCACTTTCGCGGTTTTGTTGCTCGGCTCGTTTTTAGCTAACACCTGCGTACAGAT
ACTGAAGAACTATGGATACGTTTATATACCCGGCAGCTTTGAAACAGTCAAATCATCACA
ATTTCTGTGGCCTAAAACGGAGCCACTGCCTGGGAATTCTGCCTCGACTCCTTTGCGTTA
TATGGGACATTACGGCAGTATCGTCGGTGTTACGGTTTGGCGTACTGGCAATGCGGCTCG
AATATACAGCGGATGGCAGCCTCTGCAACTGGCCACACAGCTAGTGCCGGCCACTTTGGC
AGTGCTGCCAGCTAACTTGCTCTCACCTGCCTGGGCCGTGATATTCTACTTCATCATAAT
AATGTTCGGAGTAGCGCAGCAGATCGCGATCTGGCACTGCGTCATTGCCGGTGTGATGGC
TATCAACGCGAAGACGCTTCGCATCTGGGAGACTACGATAACGTTCCTCAGCTGCGTCGT
GGGACTGGCCGTTGGACTTGTACTAAGCACTGATGCGGGTATAGCGGTGGTGCAGTTCTG
GGACTACGTGTGGGCGGGGTCGTGGTGGTCGTGCGCGGTGCAGGTGGTGGCGGCGTGCGG
GGTGTTCGTGGTGCGCGG
(2838 bp)

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