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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4682_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_B_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0017053 C transcription repressor complex
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:3.85 TPM:3.87
ORF EntryO_BomoSK1871_complete:A_BomoSK_comp4682_c0_seq1
Sequence
(Nucleotide)
TAATTTATGTTATTTTCTGTTGTTGTTAACTTTATTTAAGATTTATTTGTGTTGATTTAT
TAAATGAACTGAAAAACTGAATTAAATTAAGATCGATGGCGTCGTCAAGTAAACTACCAG
GCACTGGTCTAGAAGAAGTGGGAGTACCAGGACAAACTTTCTTGCGAGATGCTCTGACAA
GCTGTACCGACCCATTGAAAGCTATTGAAGAGTTTCAACTTGAAAACGGTATTTTATTGC
CTTCTTTAAGGCCGATGCTGCCTTTACTAGACCTCCATGGCGTTCGGCGGCTTGACTTTC
ATACATCAGTTCTGGAGGAATTACGTGAAAAACTCATTGCCCACATCAACGAGCTTGGCA
ATAAAGATAACAAGGATAATGACAAAAAACTCAAAGAACTGCTATCTAAAAGCTTCCCAG
TCGTCAGAGTTAAAGCTTTAAGACCTGTTATAATGGGTATTCTTAAAAATATCCCACATA
TAGATGATAAGTATCTAAGGGTACTAGTTCGCGACAGAGAACTGTACAATGACACAGATA
CTGAGGTGAAGCGTCAAATATGGCAAGACAACCAGTCACTGTTTGGAGATGAAGTTTCTC
CACTCCTCAGTCAGTACATCAGGGAGAAAGAAGATGTTCTGTTTGATCATGAAAATCTTA
CAAATCTATTTTTTTCCCCTTCCCCAAAAGTAAGGAGACAAGGTGCAGTTGTTCAGAAAC
TTGCCCACATGATAGGTACTAGTGTTAAGTTATATGACATGGTGTTACAATTCCTGAGAA
CATTATTCTTAAGAACTAGAAATGTTCATTATTGTACATTAAGAGCAGAGCTTCTCATGG
CCTTGCATGACCTAGAAGTTCAAGACATCATATCTGTAGACCCTTGTCATAAATTCACAT
GGTGTTTGGATGCTTGTATCAGGGAAAGGAATGTAGACATTAAAAGATCTAGGGAACTGC
AAGGTTTTTTAGACAGTATTAAAAAGGGACAGGAGCAAGTTCTAGGAGATCTTTCTATGA
CGTTATGCGACCCTTATGCTATCAATTTCTTAGCAACGTCAGCTATCAAAATTTTACAAC
ATTTAATAAACACTGAAGGGCTACCTCGAGATAGTACAGTTTTAATACTACTGCTAAGAA
TGTTGGCATTAGGGTTGAGCGCTTGGGTAATGATCGATTCTCAAGAATTCAAAGAGCCAA
AATTAGATAGTCAATGTGTCACAAAATACTTGCCTGCCTTGATGTCATTGATGGTGGATG
ATCAAGTGAGAGCACTACATAATAAGTTACCTCCAGATGAAAGAGAGTCTGCCATCACTA
CGATAGAGCACTCGGGACCTCCACCTGATGCTTGTGAAGCCTATATGAGAGAAAGCTCAG
TTTGTGGTGTTATTGCAATGTACTACACACTGCATGCAGCCAAATTACGTGACCGTGGTG
CCTTACTTCGCATTCTTAGTATTCTCGGTAGTTGTAAAGATGGTAGAGCATATGAAGACC
CATTTTTGCATGCTTTAGTGGCACTTCTAGTACAGTTACCTGATGAGTTCCAAGGAGAAG
ATTTTAGTACTGTATTATTTGATGAATTCTTCTTTGCTGGACTATCTAAGGATAATGTGA
CAAGACACTTATTGAAATTGCTGTGGTATATTCATCCAAAATTACCAGAGACTAGAATTC
AAACTCTTATGAAAGCGCTGCAGCCTGGAACTCAGCATAATGAATCTGTACATAAATTAT
ATGAGACTTTACAACAGAAATTAAATGCGCAAACAGAACCCGGTCCGAGTGCAACTGAAA
TGGAATATCTGGACTCCCCGTTAATGAGTGTACGCACGCCAGCACCATATCATATGTAGC
AAATATTCATTGTTCATTATTTACTTTTAAGTTATAGACATTACATAAATTATATGAGAC
TTTACAACAGAAATTAAATGCGCAAACAGAACCCGGTCCGAGTGCAACTGAAATGGAATA
TCTGGACTCCCCGTTAATGAGTGTACGCACGCCAGCACCATATCATATGTAGCAAATATT
CATTGTTCATTATTTACTTTTAAGTTATAGACAT
(2074 bp)

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