SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4575_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_2-phosphoxylose_phosphatase_1_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0003993 F acid phosphatase activity
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0010909 P positive regulation of heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
Transcript
Level		FPKM:0.97 TPM:0.98
ORF EntryO_BomoSK1772_5prime_partial:A_BomoSK_comp4575_c0_seq1
Sequence
(Nucleotide)
GAGTGCTGGTTCGGTTCATAAATCTCGAAAATTCCGTCACATTTGCAGAAAAATCAACAA
TCAAGCAAGGAATCGCTTAGAGTCTCATCCCGCAATCAAAGAGCTGGTCAGCAAGTTATC
TAAAGTGTTATTCGAGACGCAAGAACGTACAGACGCGGATGTCGTACGGGATGCCCTTCT
TGCCTATATGTGCCACGATGTCCCTTTGCCGTGCACGCACAAAGCCAATCACGAAAAACC
AAAACTGACCATAGACAAAAGGCACAGACTACACGAAAGCAAAACAGGAACCAGAAACCT
CTTAGATGTCGACATCGACACTTTGAATATGGAACTGGATTATATAAACAATCAGGTGGA
TTTAAACGGAGACGTGGGTAGGAAAGCCAGAGAAGTCATCGGAAAATACTATGACCTGAA
AGATAAGAAAGCGCCCTTAGATTTTGATGCCCAAATGGAGAGGGAGAAGTTGTTGTATTA
CCAGCAGAGATATTTGGATACCGGCGACACGTACGACGACGTAGTCATAGTGAAGAAGAA
TTTGGACGCGGATTTTAATTTTCCGAACGACGCTAGAATCGATGCGGACTTCGACGAAGA
CTACAAGGAGCCGACGCCCGAAACCGAAGACTTCTGCATCAAAAAAGAGCACGTTCTCTC
GTTGTTCGCGTACTTGGAGTGGAGCTACCGGCAGGAGATCAAGAATATTCACAATCGGAA
ACGGGGCTTGCTCGTCTCGTACGGTCTGCTGCACAACATAGTCCAGAACATGATACGCAT
GATATCGGAGAACAAGCCCAGGTTCGTGATATACTCCGGTCACGATAAGACGTTACAGGC
GCTCGTCTTGGCCCTCGGCTTGAGCAATTACCAATATTACAACATACAGTACGCCTCGAG
ATTGATATTTGAAGTGTACAGGAAGAAGGATCTGCGCGATGAGGTCAAATACGCGAAGAG
AAAGGCCGTGGCCCGGGACTTTTACTTCCGGGTCGTCTTCAACGGCGAGGACGTGACGAA
CAAACTTAGTTTCTGCAACGCGAAACACAATGTCGTTATGAGGGTAGTCGATCCAATAGA
TGACTTGAAAATTTACAATACATTTTTGTGTCCGATCGAGAGCATCGTAAGGTTTATACA
CGACGATTATTTTAGTGTTTTTAATGTTAGTAACTTCAAGGATGCGTGCGCCACGGCCGG
TAACAAGCGTGGATGAATCAATATACGCGAGCGGTAATGGAATTCGATCACCAATAGAAA
AATATCATATTTTGGTATCGAACGAATTTCGGCGTGAGTCGATCGCGGCGTTTGACCCGT
CAAAGTGATTAAAGTACCGGGTGTCATAGAATCGTTACCGATAATAACAAAAATCTAAAA
GCAAAAAAAAAAAACGAGTCAAAATTATTTTTTAATGTAATTATTTTATCGTCACCGGAT
CTTGAAACCTGTGTGAATTCTTTAAGTAAATCGGACGTGTTGAAGTCGGTTAAAATTACG
TCGAAACATTCCGTATAATTAATAGTCAAAATAAAAACCAGCTGATGCACGGGGTCAGTG
ACCTTGTGTGATGGTTTCAGAAAATTAAACATAATTAGTAAATAAATTATTTATTTATTG
CGTCTAGATACTATTAAGCCGTGTGCAGTTTGAGAATGGAATACTGAATGTGTCAAATAA
AATACATATCTTAAAAATACATATTATATGTTTATATATAAAGGAATATATAATGCTACG
ACTAAAAAGAAAAATTATCTATCAGTGGTGTCAGCCATAATCGGAATTTGTCGTTGATAC
TTGAAAGTATGAAATTATGTCAATAAGTATGAAATTGTCGATACCGCAATTTATACTATT
ATCCGAATTTAATAAATGAATTAATATGTGCCCTAACGCATTGATATTGAAAATTCTTAT
TTAGAAACCAGCTTGCTAATATTGTTATTGCTATATGAACTTTTAGTGCTTACTAGAATT
AATATTTAATTAAAGCGAAGCTCACGGCCACTCACGGTTGGCAGCCAGTAAACATTGTTA
TTAACACGGTCAACGCGTATCAGTGGTGTACAAATCATTAAAAAAAAAAGTTTATATTAC
ATTACCTTTCAGACGAGGCCATATATCGATATAAGTAAAGGTTTCTCTGTATGTTTAGTT
ATAGTTATCTACCTACACTACTAAAGAAAATATTGTACAATATTTTCGAATGTTCCTAAT
TTTGTTTGTGCAATATTCCTATAGGAATCATCAGATGTCATGTGACAATTTGATTCTCAG
TTTTTATAATACATGTCTTAGATGAAAGAGAACCGTTATTTCAACCCAATATAAAAATAA
TAGTACTCGTGTTAATAATAACAAGTAATGTAACACAAATAAACTTCTGGTTGCTTTACA
TTGCCGGGTCATAAAAGCGATCAGTATATATGCAATTATTATTTCCTTTTCTTGAGGATC
GGTTTCTCTATTTAAACCTCATATAAACTAAACAGTTTGCGAATACCAAAGAGATAATGA
AGCCATATGAAGCACTGTAATAGACAAGAGAGTTTTATTTATACTTTGGACGAATTAGAT
CTCAACTAAACCCAAAATCTCTTTAGATTTATTGTTACTTAATTAGATTATGTATTAATT
TTGTCCCCTCGTG
(2653 bp)

- SilkBase 1999-2023 -