SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4537_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_SH2_domain-containing_protein_3C_isoform_X2_[Bombyx_mori]
Ontology
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007254 P JNK cascade
GO:0007264 P small GTPase mediated signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:0.39 TPM:0.39
ORF EntryO_BomoSK1731_complete:A_BomoSK_comp4537_c0_seq1
Sequence
(Nucleotide)
AAATAGTTCGTCTTAAGCGAAGCCACGTTTCAAAAGGTCAGATTTAAAGCAGACTCTAAT
ATTAAGTCAGGCTCATGTTTTAAATTTAGTGCCAAAAATCTAGTTTCCTTTCAAGATCCA
CTATTTGGAAATCGCCGAGCATAGTATAATAGCGCACGCGTATAAATAAAATGCGAAGCT
AGCCAACAACACCCTTGCCAACATTCTAATAAAATTGGGGTGTATTCGTATTATTGATCT
CCAACAAAGACCGATTCCCCTTAGGTACCGGCGCTCCCAGCTGTGTAGATTTTATATTTT
TTGAAAAATAATTGCAGTGACACAGTATATCAGTTACTTAAAATTATGGATTCTTGCGCC
ATGAGTACGTCTGGTCTCTTAGAATGGGAGTTTTCTTTGCCGGCTGATCAAATAATTTCC
CATGGATGGTACCACGGAGCGTTGAGCCGGACCGCTGCCGAGAGCTTGTTGCAGAAAGAC
AGGGAGTTCCTGGTGAGGGATTCGTCATCGCAACCGGATAACTATGTGCTGAGCTGCCGT
TCTAATGGACAGCATTTACATTTCGTCATACAACGAATCGTTGTTCACCCAGAAACTGTT
TACGAGAGATACCAATACCAATTCGAAGATGAAGCTTATGATACTGTTGCCGATCTCATT
ACTTCATACGTTGGTTCAGGGAAACCCATATCTGCCGCTTCTGGCGCCAGAATACAGTAT
CCAGCCAACCGAATGATGCCGCTGACTAATTATATACAAGGCGACGACATTAATTCCGTA
ATTTCACCGGTAGGCGACGGAGCGCTTTACGGTAACTCTTATAGTCTGTACAGTCATTTC
GCTGCGAAACCTGGAATGCAATTGCGAGTGCCTTTTAAGAAACAACGTTCACATTCTCTG
ACTCCTATAGATATAGGACAGCACGTCGCTCAAGGCAAAAGCGCTAGCGCCGATGGCGTC
ATACTAAACCAAACAAATAAACACACCAAGACACTCTCCGGTGATTCCAACTCTAGCTCC
GGTACATGGGATACCAACTTGCCTACAAGTCCACCAGCCAAGCCCGCTAGATATGACGGT
CCAAAGGCTGATGATCGAAGACTCGAACTCCAACGAATCTACCAAGTATCGGGGTCCGAT
TCAGGAAACGGATCCGGAGACTCTACTCAAAGTTCTGCTCATGGAGATCCAAATAAATCA
AGAATCGATTCAGATTACAACTTGATTACACCCACCAATAAACAGCAATTCGACTATGAT
CTTACTGAAGCAAAACTACTTCAATCGGACAACTTGGACTATGTTGTGGAATCAAGGATA
AATTTGGGAAGTTTTCAATCCATGATAATACCTACGGGTCTTACGAAGCCACTAGAATCT
GAAACTTTGCACGCAATCAAACTACTCTTGAGAACATCCGGACCCCGCATCCTAGCAATT
CATTTGACGAAAGTCGATTTGTACTTTTTATTCGATGATGCTATTCAAATTGAGGGGTTA
GATAAAACTGCGTCTGGTTTGGAACTATGTTTTTTACCGCAAGGACGACCATTGCGAATG
GACGTGATTGAAAGAATTGAGACCTTTCGACTCCTCATTGCTGTAACTGTATTGACATGT
CAAACAGATCGGCAGCGCGCAGACACACTAAATGATTGGATCGTACTGGCTATTGAAACG
AAAACTGCTTTAGGCAATCTGTATGGATTTTCAGCTATAATGTTCGGACTGTGTATGCCT
CAGGTGGAATGTTTAGAGAACGCTTGGAATATTCTGAGAAGAATTTACACTGATAACGCA
TTTATGTTTGAAGCCAAGCTACGACCTAGTTTCAAAAGTATGAACGAGGGGACTAATCCT
TTACCTCCGAATACGACTACCCCATACATACTCCCTCCAGTTCTATGCTTCCATTTGTTT
GATGGCGATGGCGGTTCGTTGATTCAACAGGACGACACGTTTCCAGGAAGTTTGATGAAC
AGTATTGAATTCGATTTCAATGCGACTGCCGCGCATCTCGAAGCCGCCCGACAATTTCCT
AGTCAAATAGATATGTTCAAACGGAACTCTAGGACTGTCGTACAAGAAATGTCTTCTTTG
GGACCCACTTTAGATCCTAGATTATTGGAACTTTTCCGGACCGAGTTTCATATTAATTTT
TTATGGGGTGAAAGAGGAGCTCTCACAACTCCGAATCAAAGATTCGCGAGGCTCACCGAC
ATCCTGACTGCGATGGCCAACAAGCTGGCCAGCCAACCATCTGGAGTTGATGATATTGTG
TAATTTTGGATATAACGTTTTGCAACACTACGACTTCCTCTCTGGTGCAGCTATAGCTGT
TGTGGAATTTAGCGAAGCCGAAAAAAATCTTTTTATACATGTTTAAGCTATAATACATTT
TATAAAATAATGTGAAGGAATTGTAACTTTAAACAAATAACTGCCAATGTAACATTTAAA
GTGCAAATTTTAGGCAAGCTAGATGTCATGTAATATTTAAAACTAGTTTATAAACTGTAT
GTTAAACAAGTAGCTGTA
(2538 bp)

- SilkBase 1999-2023 -