SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4496_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_SMURF2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045121 C membrane raft
Transcript
Level		FPKM:4.22 TPM:4.25
ORF EntryO_BomoSK1683_5prime_partial:A_BomoSK_comp4496_c0_seq1
Sequence
(Nucleotide)
CGCCAGCCCGCGCTGCAGCGCCAGCCACTGCCGCTCGGCGCCTCGAGTGAACCTGTGCGC
CACGTATAGTCGCACGTACTCGCGCTTGTTCCCGTCCGTCACGGGCTCGGTGGCGCCGCC
CGGGCGCAGCTCTACGCTGCGGACGGCGCCGAACGAAGAACATTCCACAGAAAATGTCGT
GTCAATCACGCCTTGAATACTATTGTCAAGCATCCATGATAACGATCGATGCAATTCAGG
ATCAACATCTTTGATATCTCGCAGAGTTATAGGTCGCCCTAGGAGTTGCTTGTAGAAAGG
AGCTGTGAAGGCCGCGTCTAATTGATGTCCGTGGAACAACGCCACGCCCAGGATGCGGCC
CGCAAAGTGGAAGTACGATAAGTGTTCCGGATTTACTCCTGAATCAGAATTGATTTGTAG
TGCATATCTATCTTCACCAGCATTTGCATATTGAAATAGTCCATAATGAGGATTGAACAG
CTCTCTTCCCAAGAGATGAAGCCACTCTCTTGCCACCCCGCCGTAGTCGAGTCCTTCTTC
ACCACGGAACTTGACCAGCAGCCGCTTTCGAAGTTCTTTACCTCTAAGTTTCATTACGAG
TCGATATGATTCTTCTAATATTTCGTTTCGAGATACCTCTATTCTGCAATGTCCAGTCTG
GGGTTGTAATGCTTGCAGTTCAGCACGCAGTACTCGCGCTTTAGCAGCAAGGTCCCGTTT
GTATTTAGGTAGCGCGTCAGTGTCCGGGGGCTCCGGCGCGGCGCCCGGGGCTGTGGCGGA
CGACGAGAGCGAAACCGTCGCTGGTGATGCCACCGAAGACGCAGTACTCGTTGGAGCAGG
TTCGTTCGTAAGCCTAGCGGAGAGCGCGAGCCGGGGGTCAGTGAACTGCGTGGTGCGGTT
GTTGTGGTCCACGAAGTAGGGTCGTCCTGAGGGCGCGTGTCGCATCTCCCAGCCGGGGGG
(960 bp)

- SilkBase 1999-2023 -