SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4392_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat-containing_protein_46_[Papilio_machaon]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:5.82 TPM:5.85
ORF EntryO_BomoSK1589_complete:A_BomoSK_comp4392_c0_seq1
Sequence
(Nucleotide)
AAACAAATGAGTGCAAGGAAAAAGTTAAGCACGTTGTTTCTAAGATTTATTTGAAAATAA
AACTGTCGGAAGTAATATTTTATTTAAGATAAAATGAAAGTACCCCGCCAGAAAAATCAA
AACAATCCCGCTCACAAAAACGTTAAATCAGAACAAGAAAATACAAATGAATCACAAAAG
AAAAAAGTGAAACGCTATTTTGAATTGGATAAACCGGACAGTAAAACGGACACAAAAACA
GATGAAGTTAAAGTTTATAATGTGAAGGTGACTCCTAGAATTCTCTGGAATCAAAAACAG
AAGGATCAAAAAAGACAATTCTTAAAAAATGAATATGGAAACACATTCAGTCAAAGGAAA
CAGAAGAAAAAGTATCCAGGGAAAGCTCCTATTGACCCCAAACGATTGGAGAAGCATTCC
AGAGGTGAAGGCTTACAAGGAATTGGTGTTAGAAACCCAATACATAAATTAAAATTACAA
AAAAAAGAAAAATTATACCAGAAGGCATTAGAACAAGCTGCTCGTTCTGAGATATTATTA
ACTGAAGACCAAGGTTATGTCGAATTAGAAGACGAAGATTCAAATACTCGAGCTATAAAC
CAACAGATTATTGCTCGGAATATTGATATAGCAGCTGCGACAAAAATATTTGAATTAAAT
TTAGATTTTGGTCCGTACAGAGCTAAATATTCAAGGAATGGTAGATATTTACTATTAGGC
AGCAAAAAAGGGCACCTGGCCTCATTCGACTGGGTAACGAAAAAGTTAAACTTCGAAATT
AATGTGATGGAGTCAATACATGACATCAGTTGGCTACATATAGAAACAATGGTTGCTGCC
GCACAAAAGGATTGGTTGTACATTTACGATAACACCGGCACTGAACTACACTGTGTGAAA
ACGATCAGCAAAGTACTCAAAATGGAATTCTTGCCCTACCACTTTCTGTTGGCATCTGTG
AACGAATACGGTTTCTTATCATGGCTGGACATATCAATAGGAGAGATAGCGGGAGAATGT
AACAGCCGGGCAGGAAGACCGAAAGCGATGACACATAACCCCTACAACGCCACGCTCTGT
CTCGGCGATTCTAAGGGAGTGGTCTCATTGTGGGCTCCGACCGTGAAGGAACCCTTAGCA
AAGATCCTGTGCCATAAAACACCCGTGTCTGCTATTTCCGTGGACAATAGGGGATTGTAC
ATGGCGACCTCTGGTGTTGACAGAAGTATAAAAATTTGGGACATTAGGAACTTGGATGGT
CCATTGCAGCACTATAAAGTGTGGTCACCACCAGTTGACTTAGACTTCTCGCAGAAAGAT
ATGCTTGCTGTGGGGTTCAACGAAACCGTCGAGATATACAGTAATTGCTGCACACAAACT
GTATCAAAACCGTATTTACGACACAAGATGGCGAAGACTGTGAACAATTTCAAGTTCTGT
CCTTTTGAAGATGTCCTCGGTATAGGCACTGATCGCGGTTTCACAAGCATTATCGTTCCA
GGCAGTGGTGAACCAAACTTCGATGCTTTGGAGAGCAATCCATTCCAAACGAAAAAACAG
AGGAAAGAAGCCGAGGTCAAGGCGCTGCTCGAGAAGATTCCAGCAGAACTCATCACTCTT
AATCCGTTCGAGGTCACGGAAGTGGATGTACCTACGATGAAGGATATTATAGACAGCAAA
AAGAAATTACTGCACGTTAAGCCCAAGAAAGTGGATATGACACCGCGTCGTAAAAACAAA
GGTCAAACTCATATTGCAAGAAAGAAAATTATAAAGGATGCCGCCAGGAGGGACCACATT
GAAAAACTGAAAGCAGCCAGCGCGCTTTATGAAAAAGATGAACAAAAGGAAAAACCCGTT
AGAAAACAATCGTTCGGTGTTTTAGATAGATTTGTCTCTAATCCTA
(1906 bp)

- SilkBase 1999-2023 -