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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4332_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0010923 P negative regulation of phosphatase activity
GO:0015030 C Cajal body
GO:0015629 C actin cytoskeleton
GO:0016607 C nuclear speck
GO:0019902 F phosphatase binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0035363 C histone locus body
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0042796 P snRNA transcription by RNA polymerase III
GO:0045945 P positive regulation of transcription by RNA polymerase III
Transcript
Level		FPKM:2.80 TPM:2.82
ORF EntryO_BomoSK1520_5prime_partial:A_BomoSK_comp4332_c0_seq1
Sequence
(Nucleotide)
TGCTTAACATCTGTCACTGTACGGGAGCCACTTCGTATAAAAGAAGAATATTATTATTCG
AAGGGACCAGGGGAAGAACAAGCTATGGTCACAAACACAACATTCTCGTACTGTAATAAA
CAAATTTTTGATTGATGACTTGATCTTTATTAGAGTTTACTAAAAAGCCTTAAATGCGTC
ATTAAATAATAATATATATTGTAATGCGGATTGTAACGTCGAATTTAAAACGGATTTTTT
ATAAAATGTATTTATTTGTAGCATCGCTTGTTATTCCGCTGTACCTTTCGTTTTGGTCGG
TTACATTGTCCAGCGCGTAGTGCGAGGGCGCGTAGTGCGGGGCGCGTAGTGCGGGTCGCG
CAGTGCGGAGTCGCGTCGCACTAGAGGCTGCGGGCGGCGGGCGCGGCGTTGCTCGATTGT
CAGTACGCCTGAGTCGTACTCGCCGTCGATACGCGATCCTGCTTCAGGTTGCGTAGCTGA
TCGTACTGGTGCACCATACGTTTGAGATGAGTTAGTTTCTTGTCTAGATAGTTGACCCTC
CGCCGCTCGTGTTGGTAGGCGGCGTCGTTGCTGACGCGTCTGTATTCCTCGACGATGCGT
TGCTCTATGCTCTGATGGTGAGGCGACATGGGTTGCGCCCGTTTGAGTTCGTTCTCGAGC
CTAGTGAACAGCGCCGCAACCTGCGCAACCCTCGCGTACAACTCTCTGTACTCCGTGTAC
AGTTCGGCGAATTCGTTTTTGTAGGCCCGTCGCATACCCGAACTCGTGATCGGCGGGGAT
CGCCTTTCGATCTCATCTAAATCAGTCGTATTCTCGTCAGGCACAGACGTTAATTCAGTA
TTTTCTAAGGGTTCCGTATTTGTGATGTCTTTTTCTGTGATATTAGTTTGCTCTACGGGG
GGACTACTTCTAAAGCCGTTCGGTTTGACCGGAGGACTGGGACAGATTTCCTTGACTGTG
GTAAAGTTAAGGGTGTAACCGTTGTCCTTTTTAACCTGCGTTGTCGTCCGTTCATCCTCG
TTGTCGGATGCGTGCCGCTCCTCCGACGAGG
(1051 bp)

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