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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4319_c1_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_synaptojanin-1_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006796 P phosphate-containing compound metabolic process
GO:0006836 P neurotransmitter transport
GO:0006897 P endocytosis
GO:0007612 P learning
GO:0016082 P synaptic vesicle priming
GO:0016191 P synaptic vesicle uncoating
GO:0016787 F hydrolase activity
GO:0030117 C membrane coat
GO:0030132 C clathrin coat of coated pit
GO:0034595 F phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596 F phosphatidylinositol phosphate 4-phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042578 F phosphoric ester hydrolase activity
GO:0043647 P inositol phosphate metabolic process
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0052629 F phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052659 F inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity
GO:0097060 C synaptic membrane
GO:0098793 C presynapse
GO:1901632 P regulation of synaptic vesicle membrane organization
GO:1903390 P positive regulation of synaptic vesicle uncoating
GO:1904980 P positive regulation of endosome organization
Transcript
Level		FPKM:3.63 TPM:3.66
ORF EntryO_BomoSK1506_3prime_partial:A_BomoSK_comp4319_c1_seq1
Sequence
(Nucleotide)
ATTCTGTCCACCAAGTCGAAGATTGGTCTCGGTTATTCTCATATAAATTTATAATTGTTA
TTTGACTTATCTTAAAAGCTAATGGCGTGATAATCGCCAAATAGAAACTAAACATGGCTA
TGTCCAAAGGCTTTAAAGTTCTGGAGAAATCATCGCCCCCCAGTCCGTATAGCATAATAT
TACAACACAGAAACAAAGACACTGCACTTCTTTTCGAATCTCAAGCCGTTGTTTCCTTAT
CATCGCAAGAAACAGAAACTTTAAGGAAACAATACCATAAAGTTGCAGACGCTTATGGAT
GTCTTGGAGTACTTCAGCTAAATTCTGGTGAAAGCTGTCTTCTGTATCTTGTGTTAATCA
CCGGATGCTCTTCTGTTGGTAAAGTGGGGGATTTAGAAGTATTTAAGATAACGCAAACTC
AATTTCTGCCACTGTTCTACCAATCGCAAGGTGATGATAAGGTTTCGGAAGTCCGAAAAT
TAATTAATTCAGGTACATTTTATTTCTCTTGGTATTCTGGCAAAAACAATGATAATCTTT
TTGATTTGACTCTGTGTGCCCAAAGAAAAAGTAAAGGAGCCAACCCTGATAATAGGTTCT
TTTGGAATAGAACACTGTACATACATCTAATCAGATATGGCATAGATTGTGATGAGTGGC
TAACTCGAGCAATGTGTGGATCTGTAGAAATACGCACTATTTATGTTGGGCATCGTCAAG
CTAGGGCTGTACTTGTCTCAAGACTTAGTTGTGAAAGGGCTGGAACTAGATTTAATGTGC
GAGGTTGTAATGATGATGGAAATGTGGCAAACTTTGTAGAAACTGAACAAGCTGTTTACA
TTGATGATTCTGTAGCATCTTATATACAAACAAGAGGGTCTGTGCCATTGTTTTGGGAAC
AACCTGGAATACAAGTTGGCTCACACAAAGTAAAAATGTCAAGAGGCTATGATGCATCAA
CAAGTGCTTGTGAGAGACATTTTGCCCAGTTAAAGCGTAATTATGGATCTGTAATAGTTG
TAAATCTGCTTGGATCTAACATGATTGGGGGTAGTGAAGGTGAGGCAACATTAAGTAATG
CTTTCCAGAAACACATTAATGAATCTCCACATTCTGATGTCCTACAAATTGTTTTTGACT
ATCATCAGGAAGTAAGAGCAACATCCCAAGAGATAGCTCTATCAAAATTTAAACAGAATA
TTGAGAAATATTATGATGAGATTGGGATTTTTAGTGCAAAAGGGTCAGACATTTATAATA
TTCAAAAGGG
(1270 bp)

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