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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4319_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		Synaptojanin_[Operophtera_brumata]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004445 F inositol-polyphosphate 5-phosphatase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006796 P phosphate-containing compound metabolic process
GO:0006836 P neurotransmitter transport
GO:0006897 P endocytosis
GO:0007612 P learning
GO:0016082 P synaptic vesicle priming
GO:0016191 P synaptic vesicle uncoating
GO:0016787 F hydrolase activity
GO:0030117 C membrane coat
GO:0030132 C clathrin coat of coated pit
GO:0034595 F phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596 F phosphatidylinositol phosphate 4-phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042578 F phosphoric ester hydrolase activity
GO:0043647 P inositol phosphate metabolic process
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
GO:0052629 F phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
GO:0052658 F inositol-1,4,5-trisphosphate 5-phosphatase activity
GO:0052659 F inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity
GO:0097060 C synaptic membrane
GO:0098793 C presynapse
GO:1901632 P regulation of synaptic vesicle membrane organization
GO:1903390 P positive regulation of synaptic vesicle uncoating
GO:1904980 P positive regulation of endosome organization
Transcript
Level		FPKM:3.86 TPM:3.89
ORF EntryO_BomoSK1505_5prime_partial:A_BomoSK_comp4319_c0_seq1
Sequence
(Nucleotide)
GACATTTATAATATTCAAAAGGGAGTTATAAGGACCAATTGCTTGGATTGCTTAGATAGA
ACAAATTCTATTCAGACATTTATTGGTTTAGAAATGCTTGCTGTTCAATTAATGCTACTA
CAATGTCTTGATAAAAAACAAAATGTTAATAGATTTGAAGAAGTTTACAAACAGATGTGG
GTGAATAATGGAAATGAAATATCTAAAATTTATGCTGGAACTGGTGCAATTCAAGGAGGC
TCCAAACTAATTGATGGAGCTCGATCTGCTGCCAGGACTATCCAGAACAATTTATTAGAC
AACTCAAAGCAAGAAGCAATTGATATTTTATTACTTGGTTCAACATTAAACTCTGAACTG
GCAGACCGCACAAGAATACTGTTGCCATCTAACATACTACACACTTCTACAGCTATCTTG
AGGGAAATGTGTCGTAGAACGAATGAATTCACTCAACCTTCAACTCTTAGAATAACTATT
GGCACATACAATGTGAATGGTGGTAAACATTTCAGAAGTCTTGCTTATAAGGATGTTTCA
TTATCTGACTGGTTATTAGATTGTCCAAATTCATCTTTGGTAAATACAGTCAATCTGAAG
GATCATCCTTCTGACATATTTGCAATAGGCTTTGAAGAAATAGTTGATTTAAATGCTAGT
AATATTATGGCAGCTAGTACTGATAATGCAAAAGCATGGAGTGAGGAACTGGAAAAAGTG
TTAGGCAGAGATGCATCTTATACACTTCTGTCTAGTCATCAACTTGTTGGAGTATGTTTA
TTCATATTTGTTAGAAAAGATTTAATACCGCATATCAGAGATGTAGCACTTGATTCAGTT
AAGACTGGACTTGGAGGGGCTACTGGGAATAAAGGTGCTGTGGGAATAAGAATGGTAATT
TATGGAACCTCACTATGTTTTGTTTGTGCACATTTTGCTGCTGGTCAATCACAAGTTACA
GAGCGTAATGCTGATTACACAGAAATTACTAGAAAAATTGCATTTCCCATGGGTCGCTCT
CTGTACTCCCATGACTATGTATTTTGGTGTGGTGATTTTAATTATCGTATAGATTTAGAT
AAAGATGAAGTACGCCTTTTGGCTTCACAAAATAATTTGCAAAGGCTTTTGGAGCAAGAT
CAACTTTTACAGCAAAAGTCACAAGATTTAGTTTTCAAAAACTGCTTTGAAGGAGAAATT
ACATTTCCTCCAACTTATAAATATGATCTATTTAGTGATGATTATGATACCAGTGAAAAA
TGCAGAGCACCAGCATGGACTGACCGTGTATTGTGGAGAAGCAGAAAATATACTATTGAT
CCTGAAACCACATCAGAATTATCAGCAGGGAAACTTCTACACTATGGAAGGGCAGAATTG
AAACAAAGTGACCACAGACCTGTAATAGCAATATTAGAAATAGAAGTGTTACAGGTCAGC
TATACAAAATGCATGGAAGTTTTTTATGAAGTAGTAAAAGATCTGGGTCCTCCTGATGCT
TGTATAATTGTGCAACCATTACAAGACCTTAATACTGACGAGTCTGTATTTGATGATAAT
GTCATGGCTGCTGTACTCCAAGAGTTAGCTACTTTTGGTGAAGTAACCTTAGTTCGTTTT
ATAGATGAACACACTTTGAGCATCACTTTCAGAGAGGGTCAAAATGCTTTAGCAGCAGCT
CAAAAAGCAACTTTATCAGTTTGTACAGTTCCATTGCAAATTTTCTTGAAATCTCCAAAC
TGGGTTAATATTGTTCGCACAGAAATTGGTTTGTGTACAAACAACACAATACCTTTATAT
GGTGAAATTCAATCTGAAAGACCACTGAGATCTGCTCCACCTACTCCTAGAAAGCAACAG
CCGAGCAGACCCCCAGCTCCTTCACCAACACCATTGGTTCTATCGAGATTACCAGCAGTG
AGTCCTGCACGACCTCCACCCCCAAGACCTGCACCTTTGTCTCCTGAAACTAGTAAAGTT
GTGGGACAGCCCCCCATTGTTTCCCCGCCCGCCGACAGTGTTCCGCCACCTAGTTGTGCA
CCTCCTCCCCCACCGGAACCAAGTTCACCGCCGCCACTTGGACCTCCGCCTCCTGTGCCT
GCTAGACAAGGTGCTCCGCCACCCTTACCTGCGCGGCCGCGTCCTACGAATTAAACAGAC
CTGACAAGGGATGTTTTTGACAAAAACAACGCATTAATACTATGTAATACACTGTAGAAT
TTATAATAGCTACATGATTATAGCTAAATTTATTTAAATGTTGTGGTTCTATGCTGTAGT
GTTATTTGTAAAATTATGTTAAATCTGCAAGTTTTTTTTACTAGCAGTTATATATATTAT
AGTCTAAATGGCGCAAGTCCTTAAGTATTTTCAATGTTAAAAAGGCATGTGCAATATAAA
GCAAGCTTTCACTATGTTATGTATTTACAATTTATTAACTTTAAGTTTGGGCCGGT
(2456 bp)

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