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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4299_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_DNA_mismatch_repair_protein_Msh2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0030983 F mismatched DNA binding
GO:0032300 C mismatch repair complex
GO:0032301 C MutSalpha complex
Transcript
Level		FPKM:3.47 TPM:3.49
ORF EntryO_BomoSK1494_internal:A_BomoSK_comp4299_c0_seq1
Sequence
(Nucleotide)
GCCTGCGCCAGCACCGCGCTCGCGCCCACCGACCGCATCCACGTCGACTTGCCGCCCATG
TTCGCGCCGGTCACTATGTGCAGCATCACCGAGCCTCTTTTAAATTCTACGTCGTTTGGT
ATATAGGACACGCCCTCCTGCACCTCCAGACACGGATGCCTCACATCCTTCAGGATGAGT
TCGTCGATGGACTCCGTGACCACGGGCCTGCAGTACGGGTACGGAGCTGATGAAGCGGCA
ACAGCGAAAGACACCAAGACGTCTAGACGCGACAGTATGTGAGATAGACAGAACAAACAT
TCTGAATATCCACCAGCTATACTGACGATTTCTTTAACGACTTTATCTTGTTCTTTCTCG
TAGTCGGTCTTGGCTTGCGTGTACTCTTCATTAATTGATTCCAATGTATTCGTTCTGAAT
CTAACACCGCTTTTGACGGCGTCGATTATTTTATATTTCTTATCGCCTCGTAAATTTCGT
TCTTCTTTCAGAGTAATCCTGAAACAAAATCCATTCTGCGTATTATTTTCTAGTTTAATA
GTTTTGCCTGCATCGAGTCCCAAGTCCCTCGCGGCCTTCCCCAGCTCCCTCTCCGCAGAC
GACTGCAAACGTTCCAGTTGTTCGTTCAGACTCTGCAGTTGTTCGTCGAAGGAGGGCTTA
ACTAGGAAATCGCCTCTTTCTACAGCACCCATGTCAAGTGTAGCTTCTATCATTTGCTGG
AACTTGTCGAGGTCATCGTTCAGCTCCGAGATGGGCTCAGTGAGTGACGAATGCACTGTC
GTATTTTCTGCTTCAGTCAGACATTGTAACAAAGACGGTAACCTCTTGATTGCCTGATAT
ATCTTATAGCAGTCATGTAAATTAGCTTTCTTTCTGGCCAGTCGTCTGGTCAGGGCCTGT
AGGTCCGGTATGCGCCGCAAGTGGTCCTCGTGCAATTGAAGCCTCAGCTGGGAGTTGTTC
ATGAGCAGTTCCACAACGTCTAGCCGCTCGTTGATTAGGTTAATGTCGCGGAGCGGCTGT
CGCAGCCATTGAGCCAGCAACCTTTTGCCGTGCTGAGTCCGACACCTGTCCAGTAAACCG
AACAAGCTTCTAGAAGGCGAGTTCGAATTGTCGCCCAGCTCCGGTAGTATGTTGAGAGCC
GTCAGCGCCGCCGCGTCCAAGTGTAGGAAGCAGTCCGTTCGTATTGTGGACAGACGAAAT
CTGCCGAAGTTCGTACTTTCGTTTAGTAAAGCACTGTACTTTATCGTGGCCGCTAAACTA
GTCATGGCCAAGTCTTTCCTCGTCTCCGGGAAGGCGTTAGCGTCCTGCTGTTGATCTTCC
TTGAAGTTTAACAATCTGTTCAGGTCCTGCACGAGACCTTCGGTCGAGAAGTCGACTCTC
TTCAGTTTCGTTACGGTCACGTTGGTGCGATCCATTACTTTCTTCAAAGCTTTGTAGTCA
TCATTATCAGAGAACGGTATAAGACATTCCGAAGGCGCCGTTTGGACGGTTATTGTTTCA
AGTTGTGTCAGCAGATCGTCGTCGGTGAATTCTGAGACCGACATTTGATAGTCAGCAGCG
ACGACGCAAGCCACTCCCAGGAGCTTACCCTTTGAAACCGGGTCGGTTTTTATATTAACC
GCCATCAAGCATGGCGTGTTCTCGTCCGAACCGCCTAAACCTTCGCCAAGCACTTCTTCT
AATTGCGTCAGATATCCCGGTGAGCCTTTGTACTTGAGTGACCAATCGCAGCCTTTTATT
GATCCATCGGCAACGTATATTTCGACTCTGTAACGTCTCACCAATAACAGTTTCTTAATG
AGAATTTCAAAGTTTCCCTTTGAAAGTACTAAGTAATCGAGGCGGTTAGGTTCCACTCCC
ATACGTTTTATGTTGGCCACGGACGAAAAGACCTCCCGGGCTGCAGTGGTCGCGTCAATA
CCGTGAATGCTGTAGTAGTCATTGCGGTCAAATACACGCACGGTCGTCGGTGGCTTGTCA
GGAAGAGAATTAAAAAAATT
(2000 bp)

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