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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4209_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000803 C sex chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035061 C interchromatin granule
GO:0035861 C site of double-strand break
GO:0051984 P positive regulation of chromosome segregation
GO:0090398 P cellular senescence
Transcript
Level		FPKM:3.21 TPM:3.23
ORF EntryO_BomoSK1425_5prime_partial:A_BomoSK_comp4209_c0_seq1
Sequence
(Nucleotide)
GAGCGCGAGCAGGAAGGCCACGGTGGAGTAGGACTGCTCGCCGCCGGACAGCCCCGCACT
GTGCGGCGCCGCGCCCGCACTGCACTGCAGGCGCAGCCGACCCGACGCCGCGTCCACCTC
GATGTTCCCGCAGTATCCTCTCAGCGTCAGGATGGACTGGAATATGTAGTACAGCTGCCT
GATGATGTAGGTCTGCGCGAAGTGACTGAACTGCAGATGTTGCTTGGCGGTCTCCTTGAT
GGATTCAATGACGGCTCCGAGCTGCTGCAGTTCCGCGCTAATCTCATGATATTTCTTCTT
AACGACGATCAGTTTCTCGGCCACCTGCACCTTCGTCATGCCGTTGCATCGCATCGCGTT
CATCTTATCTTTTGTATTTTTCAATTCTTCCGTTATCAATGCTTTTTGTCTGGGGTTGCG
AACACGAGGACAAAGCTTCGACGTTTCTTCAATTTTTGTTCTGACGACTTCCTTTTTCTC
TTCCAAGGCTGCTTTGGTTCGAGACAACTCCTTGCGGTATTTTTGCACGCGAACTTCACA
TTCGGTTATTTGAGACGCAATATTCTCTAATTTGATTTGCTCCCGATCTATTTCTTCCGT
GAGGTCCCTGCAGGCGGACGTGAGGTCCGACAGTCGGTTCCGGAGCTCCCTCACTTTGTT
ATCGAGCTGCTGGTGCTGGCCTCTCCAACGCTGCTCTTCCGCTAACTGCGCGTTCAACTG
TTCTTGTACGCTTTGGGCTTTTTCTTTGGACAATTTCAATTCGTCCTCCAGCACAGTTTG
TCGCGGCTCCTGGTACTGCTCGAGTTCAGCTATGGCGATCTTCTCCTTCTCCTCTTTGTC
GATCTTGTCGAGCGCGAGCGCGTGCAGCGTGTCGGCGAGCGCGC
(884 bp)

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