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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4196_c0_seq2
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_scavenger_receptor_class_B_member_1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001530 F lipopolysaccharide binding
GO:0001618 F virus receptor activity
GO:0001786 F phosphatidylserine binding
GO:0001875 F lipopolysaccharide immune receptor activity
GO:0001935 P endothelial cell proliferation
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005901 C caveola
GO:0006702 P androgen biosynthetic process
GO:0006707 P cholesterol catabolic process
GO:0006869 P lipid transport
GO:0006898 P receptor-mediated endocytosis
GO:0006910 P phagocytosis, recognition
GO:0008035 F high-density lipoprotein particle binding
GO:0009986 C cell surface
GO:0010595 P positive regulation of endothelial cell migration
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0010886 P positive regulation of cholesterol storage
GO:0010899 P regulation of phosphatidylcholine catabolic process
GO:0015914 P phospholipid transport
GO:0015920 P lipopolysaccharide transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0030169 F low-density lipoprotein particle binding
GO:0030301 P cholesterol transport
GO:0030666 C endocytic vesicle membrane
GO:0031528 C microvillus membrane
GO:0031663 P lipopolysaccharide-mediated signaling pathway
GO:0032497 P detection of lipopolysaccharide
GO:0033344 P cholesterol efflux
GO:0034185 F apolipoprotein binding
GO:0034186 F apolipoprotein A-I binding
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034383 P low-density lipoprotein particle clearance
GO:0034384 P high-density lipoprotein particle clearance
GO:0035461 P vitamin transmembrane transport
GO:0042060 P wound healing
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043534 P blood vessel endothelial cell migration
GO:0043654 P recognition of apoptotic cell
GO:0043691 P reverse cholesterol transport
GO:0044406 P adhesion of symbiont to host
GO:0046718 P viral entry into host cell
GO:0050764 P regulation of phagocytosis
GO:0050892 P intestinal absorption
GO:0051000 P positive regulation of nitric-oxide synthase activity
GO:0070062 C extracellular exosome
GO:0070328 P triglyceride homeostasis
GO:0070506 F high-density lipoprotein particle receptor activity
GO:0070508 P cholesterol import
Transcript
Level		FPKM:1.74 TPM:1.75
ORF EntryO_BomoSK1417_complete:A_BomoSK_comp4196_c0_seq2
Sequence
(Nucleotide)
AAAATCCTTTTTAAAAACTAAAGAATTTTATATAATAAAGATCATCTCACAACCCTTTAC
TGACATTGAAACTTAGCAAGCATGGTTGTGAAAACGCGAAGGAACAGCATCAAAGCGAAA
ATGAAAAGCAGAAGAAATATACTGGCGAGTGCCGCCTTCGGCGTAGCATTCCTAATTATA
CCTGTAGTAGTTATTTTCATTGACCCTATATTTTTGGTTGCACAATATCAATTAAAATTG
ACGAAGAATAGCTTGCTCTCCTATTTTTTGAAAAAGGAGTTAAAAGGAGCTCTCCTGGAG
GTCTACCTCTTCAACGTGACCAACGCCGAGAGGTTCCTCGATGGAGCAGACAAGAAGATG
AAAATGAAAGAAATCGGCCCATTTGTTTACCAAGAATACAGAAGTAATGAAGACATAGAT
TTTGATAATGAAGCACCAGTAATCAGGTTTACACCGAAGTTGAGAACTGTTTTCATGCCT
GATAAGTCAGTAGGTGATCCGAAGGATATTACACTGAACGTGCCTAACATCTCCTTACTG
ACTGTGTCGACTTTAATGGAACCATACCCCTTCGTGGTCCGACAGCTCTATAACATCCTG
GTGAATCAGGTTGATACCGAGGGGATCGTGGCGAGGGATGTCCACAGTTGCCTCTGGGGT
TTCCGCGACCCTATTGTGTCTATAGCCAAAACTCTTGCTCCAGGCTCGATATACTATGAC
AGTATAGGAATCTTAGAAAAGTTGTACGATCCATATGTTAAATACAGAATTGAAATGGGT
AGAGAAGGAGCAGATAAATTCAAAGTTTTAAATGTTCAGAGAACACGCAAAGAGAAGATG
TTTGATTCAAACGATTCTGTTAATAAGTATTTTGAATTTAATGACACATATGAAGGTGCA
GCTTTTCCCCCACTGATGACTCCACAAACCCCAGTTAACTTGTACCGCCTGGGAATCTGC
AAAAGCTTCCAAATGAAGTACCAAACCCAAGAGGACCTAAAGCTGGGAGCCAAATTATTT
GTGTACGGGTACAGTAACAGTACATTTGAGAACACCAAGATATGCGACAGTAAGGGATGG
TGCCCCTTTGGCCTTATGGATTTGTCGTCTTGTTTTTACCATCTTCCAATGGCGTTATCG
AAATCACATTTTCTCGACGCTGATCCTTTACTGCTTGAAAAAGTTGAAGGCCTGAAACCA
AACAGAGCCGTTCATGACAGTAGCTTGTTGGTAGATCCAAAGGCAGGTCTAACAATAGGG
ACGACTCTTGAGCTGCAGCTCAACATCATGACGACGGACTTGACGTTCAACCACCAGTCC
CGGCTGTTCTCCGACACAATAGTGCCTATAGCGCGAGCCAAAATCACCTTACCGGAACCA
CCAGAAGAAACGAGGTCCTCTCTAAAGTTAATGTACGAAACGGGCCCGCAAATATTGCTT
ATTCTAGAAATAATCTCGTGCTCTCTAGGCATTTTACTTTTGTTGAATTCTGGAAGGCTG
GCCTGGCGGGAGCGTCGTAGAGAACTAGGCCCAAAGACGTTCACACCGCTTCAAGGAAAA
ATTAGCGCACAACCACTACTAAGTTCCTGAGTTAAATTATACAAAAGAAACATTGTGTGA
GTCATGTTTAGTTAGACCTGAGCAATCAAGCTTGGTTGAGATAAACCTGGCCTTAGATAG
TGCATCAAGTAAGCGGTCTTCTCGTGTGTAATAAGACCAAGATAATACATATCAGTGACA
ACTAGTGTAATCAGACCTAGAGCACCAAATATCGAAACATGTGATAACAGTAACCCAGTG
AATCCAGATCCATCCATATGATCCAACTAACTCATGTGTTTCATTCTTGGTAAATAACGA
AGAATTGAAACGTAAACATATTCGTCCCAACACCCTTCGCCCACAGCTACTTCAAACTAG
AAAGCGGTTGATATGGAATTTGTCTTTCTAGAGTATTGACCCCAATTTAATAGGTGTGCG
GACAAGCTCAAGTTAAACCCAATGTGTCAAGTAGTTATCTGTTATTGTAGACAGTATCCC
CCTTGAAACATGAAGTCCGAGTCTTAAGAGTTTTTTTTTATTGGTTAGATGAGAGGACGA
GCTCACGGCCCACTTTGTGTTAAATGGTTGTCGGAGCCCATAGACATCTACAAT
(2154 bp)

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