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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4150_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_I-specific_transcription_initiation_factor_RRN3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0001164 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001701 P in utero embryonic development
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0007000 P nucleolus organization
GO:0007028 P cytoplasm organization
GO:0008283 P cell population proliferation
GO:0010976 P positive regulation of neuron projection development
GO:0042254 P ribosome biogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048872 P homeostasis of number of cells
GO:0070063 F RNA polymerase binding
GO:1902254 P negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:2000142 P regulation of DNA-templated transcription, initiation
Transcript
Level		FPKM:4.15 TPM:4.17
ORF EntryO_BomoSK1377_complete:A_BomoSK_comp4150_c0_seq1
Sequence
(Nucleotide)
AGTATGGACCGTGACTAAAAACATGTTTTAAGCATAAAGAGATGCAGGATAGCAGCATCT
AAAACTTCATTGTTTATCACAATAAGTTATACAAAGTAAATTAGACAGTTTCATTTATTT
CTAAAGTTTTATAGAGTACATTTTTACTTTTCTCCTTAAAAATAAATAAATAAATTTTAG
TATGGTATGCTTTCACTTGTTCTAAATCCAGGTAATACTCCATTGGACAGTGAGCTTGCT
AGTTTAGAACATGGACTAACAGACATTAAAAAGTCGTCATCGTCTGCCTCCATTTTCTTT
TTCATGTTTGAGTATTGAGTTTCGTCATCGCCTTCTTTTAACCAGTCTTTGTAATCGATG
CACAGCGGCCATATTATTTTACCGCTTCTAGGTAATTGATAAGGGTCGTATGGAAACCAT
TCATCATACTGCAAAATATCTGCAGACTGTAACGTGTGTCGCGCGTTGTTCTCAATAATA
GCTTGACAATACACAATTTGGTGAGATCGAGTCACCGATGAAAATGCTCGTGTCACTTGC
GGTGGGCAGGTGCGGAGAGGATTCAGTGTGCAAGCCACTAGCCGAGGAAGATTAAGAGAC
TCCACAAAGTTTAAGCTTTCTTTACTCATAAACAGATGCTGGTGTTTGAATGCAATTAGG
TAAAACACAGCATGACATATAGCATGGAAGGCTCCATGAGCTTTAATGTTATCAGTAACA
GTGGTGGACTCTTGAGCTGCAGAGATGTAGGAATGGCACCAATCTGTCATTGTCTTCAAG
AATTGTACTAATCTTGAGTTAGGAACTCGAACACAACGAGCCAGCAGGCCTGCAAGATGA
CTGGCAGCTGTTCGTCTTGTTGCCAATGCACCAGGTCCTAGACCTTGAAGCCCTGCCGCT
ACTGTCCACAGATTGTTGAGAACTCGGTCAGCGCAATGTTGGTTTATTGATATTGTATAC
AGCAGTAAAAATTGAACATGCCTGATTCCGTAAGTTGGTAGTATTATTTTTTCAAAAGCT
GTGCACATGTGGTGCAAAATAGGGTCTCTTTCTTCCTGTAGCCAGTGCAATACTTCTAGC
ATACTATAGTCTAGGGTTTCAGAGATGTCATCATGTTGTTCCACATCCATGTCAAATAGT
GTGTCATTCTGTTTCATTTTATTGTCACTTTCCACTATATTGCCATCCATTACTATCATT
CTATTAATAATAATCATCATAATTTCCTCTGTAAGTGAAGGTAGGTATTTGCTAATCCAT
ATAAGGTTATATATGAAAGATCTATTTGAACTACAACCAGCTTTGTGATATGGAAATTGA
TCTATCACAGTCTCCATTAAAAGTTCATTTGTCATCGGCATTATTGCGATAATTTGTCCT
ATGATTGTATGAATGTTAGACCAGCTATTCAATTTCTCTGTTGGTGGAGTGTCATCCCAG
TTTTCTTCATTAGCTTTAAAAACCTTAACCAGACAGCTCATCACTTGCGGACAATGGTAA
ATATGTGCAGTGACTAGGCTAATGATGAAGGTGCTGAAAAGGTTGACTAACTTTTCACAC
CTACTAGCCCACTCAACATTGCACACTGCTTCTACAAACTGCTTGAAATCCTGTCCCATA
ATCAGAACGCAAGAGAGACAATCTTCGAGAATAATCCGAAAATTCTCATCATTTAATGGG
TAATCTCTCAAAACTCTGACTAATTCCGAGTAAGGTCCAATGTTTCCTGTTTTAGCATAA
TTAAGAAGTATCTGTTCTATTTGTTTTTCGGAGAATTTCAATCTAGTACGAGCTAAAGCC
GCTTGGCGATCCAGAGTTTTTTGCATCAAGGACGCGACGCTTTTCCTAGCCGCTACCGCC
ATTACTTCTTCAAGTCTTTCGTGATTGCCTTTAAAAACTCTGTTACGTCTGGTTGCCGAA
GCAATTCTGCTTTTTTGTAGTTCAGTACTTCGCGTAAAATATTACTACTATCTTCTATGT
TCGGGACAGTATTTGTGTTCGGATCGTAGCTCGTACTTGGTTTGCTGTACCCGGCGCTCG
TGTCGGAAACGTCAGTGTTTTTCTTGTCTTTCAAATAAGACTGTAATCGCTCTAAAACAG
CCTTGTTGTCACTTTCTTTCTTTTCTGGGCTATAACCTTCTCTCGACATAGCTTAACGGT
AACTCTAAGTTTTACATTGTGTACAATGTTGCTGATGTTTTATTGATTAATATTTATGAT
GAATTAACGGAAAATGTACACGTACGTTCAAATTAAACCACCTAAACCTAATTCTTCACC
TCAGTTCCTTTTATGAACACGTGCGCAACGTGCG
(2314 bp)

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