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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4130_c0_seq3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_protein_Aatf_[Papilio_polytes]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0007346 P regulation of mitotic cell cycle
GO:0019904 F protein domain specific binding
GO:0032929 P negative regulation of superoxide anion generation
GO:0040016 P embryonic cleavage
GO:0042254 P ribosome biogenesis
GO:0042985 P negative regulation of amyloid precursor protein biosynthetic process
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043522 F leucine zipper domain binding
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048156 F tau protein binding
GO:2000378 P negative regulation of reactive oxygen species metabolic process
Transcript
Level		FPKM:5.80 TPM:5.84
ORF EntryO_BomoSK1357_3prime_partial:A_BomoSK_comp4130_c0_seq3
Sequence
(Nucleotide)
TAGTTGTAGATATTAATTAATAATTTTAATTAAATTTTAAATAAATAAAAAACTATTTAA
ATTAAAATGAAAGCAAAGACTAAGAAATCGGTGAAAATAATGTTATCTGACAAAGTAGCC
GACGCACTAACACTAAAGCCACGAGTGGATATCGAAGACGACCAAGTATTTGGCACGAAA
CCACAAACCGTTTCGCGTGCCGATTTAGGATCTTCGGACAGCGAGGACGAAGCCGCCATC
AGTGATTTTCGTAAACGTAACGTTAATTTACTGAGCGAAGTCAGTAAAAAGTACGAAGGT
CAAGTAATAACGCGAAAAGATTTGAGTAAGTTTAGTGATGACAGTGATGAGTCTGGAGAT
GAAAGTGACTATGATAAAACTAGTCAGGATGATAAAGACGGAACCCCTGAAGAAAAAATT
ACAGACGATGTACTACCAAAAGCACCAGATACTGACTCTGATAATTCATCAGACGGAGAA
AGTGATGATTATAGTATTACCAAATTTCAGACAAAAACACAATTGGATGATGATGTTAGC
GATGATGATGATGAAGATGAAGATGAAGGTTATGATATAAGTCAACTAGAAGAACCGCTA
GTTGAGGATTTCCAACATGTAAAAAAACAAAATATTTCCGAGGAAGCAAAGAAAGGTAAC
TGTGTAAGAAATCAACTCCTTGTTTGGGAAGGGCTGTTGGAGATGAGGATACACCTGCAG
AGATGTGTGAATAGTGCCAATCAAATGCCAATGCCAGAGACATATAATGAACTGAAGAAT
AGCAATGAATTTGTGGAAGAAAGTAATAATACAAAGTTAAATGTAGCTACAGTTTTAGAT
AAACTCTTAACACTGCAAAACATACTATTCAATAATTACCCAGAAACTAAAACAT
(895 bp)

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