SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4101_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_protein_Gawky_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 C P-body
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0031047 P gene silencing by RNA
GO:0032880 P regulation of protein localization
GO:0035195 P gene silencing by miRNA
GO:0045475 P locomotor rhythm
Transcript
Level		FPKM:3.11 TPM:3.13
ORF EntryO_BomoSK1333_complete:A_BomoSK_comp4101_c0_seq1
Sequence
(Nucleotide)
TGAACCCCGTCGACGAAATCATTCCATCCAGCCGTCGAAGCCGTATTCTCGGGGGTTTGG
GATTGTGGTTTTTCATAAATCTCGAAAGGAAATGTGCCAATAACTATACAAAACGAAGAT
AACTGAAACGTCACGAGCTGACCAAGCTGCTAAGGATCTGCCGAGCCCGAATTATCTGTG
ATATACAGCTCAGCCTCTCGTCCGTCCTATAAGGGCTGGGCCACCTGGGGCTAGGAGGCG
AGTCTGCAGCAGCTTCCAGCGGTGATCTCACCTGTCCTCTGTTACAGAGGCACATAAACT
GCTACCTGCTTTATTGACTGCATCACTACGAACCATTGTTACTTAGTCTTTAATTGAAAC
AATATGCAATCTGTGAAAATAAGTATAATGCTAGGTGGATATTGTAGAAAATTCTATTTA
TAATAATTGTCTGATGTCTAATGTTTCTGTAATATTATGTGTTCCACATTTAATTAAGGA
TAATTGTTACTCCAATATTAATACTGTTACCGAACCAATGCAATGTAAAGACACCACCTT
AATGTTGGTGGTGAACACAAATAAATTTGGTGCTTCTAAGCGAGTCGAAGAAAAGAATGA
GAGTCAGCGAGTTAGTGTAAAGATGATAGATAATAATATTTATAATGTAGAGTTTGTTGT
TAGTGTCCGACAAAACCAAATGATTGGCGATACGCCTAACTACTGCATTCCTTTAAAGAT
TAACGCCATAACAGTCCAGGGTATCTCATACAGTGACCCGTATTTCAGTAGCTTTAACTT
AAAGTATAAGATGGCGTTTCGAGCGCCAGAGTATATGAACAAGTCTGATTACGCTTTTAA
ATCCTCAGTTTGTATTATACAACATGAGTCTTGTGAGATGCAACTACTGAATGATAAGTC
TGCTCATGATATAATGTGCAAAACGAAAACTCGAATGATCAGTGACACAGAAATGTCTCT
GAGAACGCACCATGACAATAATGTATCGAAACTTCATGATGAATTGGCCCTTGTGCCACA
CGTAAAGACATTTACAAATGGTGATCTCACCTTTGAAGCTATGATAGAATTAGCAAATAA
CGAGAAGAAAATTATAAATACTATGAAAAGCTCAGATCTGGATAGTTGGGGGAACCCATA
TCGTCTTAGGCTTTGTGGTGGAGGTGAAAGTTCCCTTAATGCTGGCAGTGGCTGGGGTAG
TCCTCCAACAGCCAATAATAATGCTGGTAACTGGGGTGGTAGCACCAGTGGTCAAACAAA
TAACGGAACAAACAATACTCAGCAATGGAATAATACAGCTCAACGTCCGCCTACTTCTCA
AGCTGATTTGAACAGCAACAAGGGCAATGGAAACCAATTGCCACCAACCAGTGCTGCATC
TGCACAAAATTGGCAAAATTCTCCACCAAACCTGCCGAATTCACAACCTAACAATAATGG
AGCACCTGCTAGTAATGGTACAAATAATACAACTAATGGAAATAATGGAATTAATAATGC
TAATGGGGGTGTGAATGGTTCAGCTGCTGGCAATGGGACCAATGGTAACAACAACAGCAC
TTCATCAGCCAAAATTGAACAGTTAAATTCAATGAGAGAGGCATTATTTAGTCAAGACGG
TTGGGGAGGTCAACATGTTAATCAAGACACTAATTGGGATGTCCCCGGTTCACCTGAACC
CGGTGCAAAAGTTGAACCGACAGCAGCAGGAGGACCTCCTGCATGGAAACCCAATGTTAA
TAATGGTGCTTTCCTTGGAACTGATCTGTGGGAAGCTAATTTGAGAAATGGTGGACAACC
ACCTCCACAACCCGCTTCTAAGACACCTTGGGGTCATACTCCGACGACTAATATTGGTGG
CACCTGGGGAGAAGATGATGATGTTTCTGATTCTGCTAATGTGTGGACTGGGCCTCCACC
ACCACAACAGTGGCCAGCTGGTCCACCACAACATTCTCAGCAATGGGGCATGCCAAAGAA
AGATGATTGGAATGCTTGGGGTGAACCTCATAGAGGAGCAGATCCAAGATTGGATCCACA
CAGAGGCTCCGACCCTCGGCAGCAGCCCGTGGATCCTCGTCATGATCTGCGTGGTGGTAT
TTCGGGTAGACTCAACACTGATATGTGGAGCCAGCATCAACATACAGGACCGAGCAAGAT
GATGCCAGGCAGTGGTGTCAGTCAATGGGGAACACAGGGACCAAAGGACTCTATCAAATC
GAGTGGATGGGAAGAACCTTCGCCACCAGCGGTGCGGCGCACTGGCAGTGGATTTGATGA
CGGTACGGCGTTGTGGGCTCAACGAACTGGAATGAGTATGGGTCGTGGAGGCCCACAGGG
ACCGCCCACCCAGTCTCGGATACCGCCTACGCCCACTAAACCTGATGCGGTGTGGGGCTC
TCACTCTCAGCGAAATGGTTCTTGGGAAGAGCCGCACGCTCCGGCGTGGCCCGACCGAGA
TGGGCCAGCTTGGCCGGATGCATCTGGCCCGGGATTATGGCCCGTGCCCAAACCGAAACC
GTCCGGCCCTGCAGGTGGCTGGCCTGACGATATTGGAGAGTGGGGTGGGCCCAAACCACC
TCAAGGGTCCCTAGCCAAACAGCTTCCAAAAGAAGTCATTTGGAATAGCAAGCAATTCAG
ATTTCTGGTGGAAATGGGTTTTAAAAAGGAAGAGGCAGAAGTAGCCTTGCGTAGTCGCGA
CATGAACGCTGAAGAAGCGCTAGAACTGTTAGCAGGCGCACGAGGTGATGGTTGGCGACG
CGATGAACATTTTCATCCTGGAGGTGGATTTCAACCTCCTTCCGTTCCCGCGGTATCGCC
TGCTGTTGTACAGAAACTGCTCAACCAACCTCCACCGCAGCCAGTGCACCATCAACAATA
TCCCACCAGTGGTACGGGTAATAGTGGGCAGCCAAGTGCTGCTCAGCTCCGCATGCTAGT
CCAACAAATACAAATGGCTGTCTCTGCTGGCTACCTCAATCATCAAATATTGAATCAACC
ACTGGCGCCTCAAACCCTCGTTTTACTAAACCAACTTCTACAACAGATAAAAGTACTTCA
GCAGCTTTTACAGCAAAACTCATTGGCTATGGCGAAAGGGCACTCTTCAGTAGCCCTACA
ATACTCTGTACAAATTACTAAAGCGAAGCAGCAGATAACTGGGCTACAAAACCAAATAGC
AACACAGCAAGCGTTGTACATGAAGCAGCAAAGTGGAGGCGCAGACTTGTTCAAGCAGGG
TCATGACCCACTTGGTCCATTACAGAGCAATTTTAATGAAATATCCATCACGAAAGATAC
ACAACCGTCTTTTGGTGGAAGTGGAAATCAGCAGTCTCGCCTAACTCAGTGGAAGTTGCC
TTCTCTTGACAAGGAAGGTGAAGGCTCGGAATTTAGCCGTGCCCCCGGTACTGCCAAGTC
TGCTACAAGTCCTCAACTTAACCAGCTAGGATTGCAGCCTGATTCGACATGGGGAGTAGG
TCGTGGCTCTGAGGGCTGGGGCGACACTACTTCTGATGTGGCCGACGGAAAAGATTGGCC
CACCCATACGTCCCACCAGCCTGTCTTTGATCTTGTACCTGAGTTTGAACCTGGAAAACC
TTGGAAGGGTAATCAGATGAAGAGCGTCGAAGAAGACCCTGCGATGACACCCGGTTCAGT
CGTCCGATCACCATTGTCGCTGACTGCCATCAAGGATACCGACATGCTAGGAGGCAAGAG
TTCCCCGCCCGGCGCTGAGCGCAGCCTCTCCTCGTCTACGTGGAGCTACGCGCCGAGCGC
TGCCGCCGGCAAGGACGCGTGGGCCGGCAAGCCTCGCGCCGCACCGCCCGGTCTGAACAA
GCCGTGGCCCCAGCCGCGCCATCCGATCCCGTCTTGGCAGGCTTCCACTTGGCTCCTTCT
CAAGAACCTCACAGCTCAGATTGATGGTTCCACACTCAAGACCCTGTGCGTGCAGCATGG
ACCTCTTCTGAACTTTCACTTGTACTTAAACCAGGGGTTGGCTTTAGCTCGCTATTCCAC
TCGCGAAGAAGCTGCCAAGGCTCAGATGGCACTGAACAATTGCGTGTTGTCTAACACGAC
GATATTCGCGGAGTCTCCCGCGGAGTCGGAGGTGCAGCTGATCCTGCAGCACCTGGGTTC
GGGCGGCGGCGGTGCCTGGCGCGGCGGCGGTCAGACCAAGGAATGGGCAGGGTACAACTC
GCTGTGGCCCGACCAGCACGACCAGCGGGCGACGCCCTCCAGCCTCAACTCGTTCCTGCC
GCCGGACCTGCTCGGCGGAGAGTCCATCTAAATCGAGTCGGCTTGGTTCCTCGGATAGAG
TTAAGACTCTCGTTTGCGGAGGTGAGTCAGCGCCTCCGTTTCCTCATATTTATTTTGTTG
CGCTCGAGGGCTGTTGCTGTTTTGTCCGTCGGGCGATCGCGTTCCGAGATTTGTTCGTGT
TCGTTTTTTTTTTTTTAATTTTTTATTAAAAAAATATAGAAAAATTTTTTTTAGTCTCTT
TACAAACAGG
(4510 bp)

- SilkBase 1999-2023 -