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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4070_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_10_[Bombyx_mori]
Ontology
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
Transcript
Level		FPKM:3.29 TPM:3.31
ORF EntryO_BomoSK1296_complete:A_BomoSK_comp4070_c0_seq1
Sequence
(Nucleotide)
GCATGGCCTCGACGTCGATCTCGTCTAAGATTTTACTGTAGAAAAGCCGCCGCTATTTAT
TACTAATATTGCGGCGTTAAATTTCGTGATGGTGTTCTCTTACAGGCCATGGATTTGATG
AAAACGGAATATGAGTTCCTAGACTTGTCTGATGTGAAGGGAGCAGACCTGAGCAGTCTG
CAGTGTGCACTATTTGAAAATAAATTGGACTCCGCTGCGGCCCATACCGTTGGTCGCACG
AAACCTGCAATAGGTGGATCCTCTGGTGCGAGCAAAGTGGGAATTCCGACCGTGTCGAAC
AGCGTGGATAGTCTGTCGGGCGGCGAGGGCGAGATGGCGCCTCACTCGCCGGCGCGGAGT
GGTGCCGGGCCGGCCCCTCACCCGCCGCCCTACGCTCAACCTCCACCCACTTATCCACCA
CCGCACGCGCAATGGCCTGTAGCACCACCCAACGTGTACGTGAGCCAGGTCACCGCGAAT
GTCAACGTACACGGTTATATGGGCCAGTACTATCAACCGCCCACGCCACAGTATGTCCCA
TCAACGCAGGAACGTGCTCCTCGTACCAATCGACGGGACCGACGCGGCAAGCGGCAGCCA
TCACCCCCCTCTCATCAACCCCAACCATACTATTTACAGTACCCGCAATATTATCCGGCT
GCACAAGCGCAGGGCGCTCCCCTTTACCACTTGCCTTTTTATCAACCTTTAGTGTATGGA
CCATACACATACCCTCCATATTATCCAGAGTACCCAATGCCTGTAGAAGGAGATGCCGAG
AAAGGCCCAGAAGAATATCCACCTGAAGTAGTGATGGAACAAGAAACAGTTGATGCTTAT
TATGCTAGTGCTCATTATGCCGCTCCACCTTACGGGCCACCAGTAGAAGGAGCCGTGGAA
TACGTCCCGCCGCTTTACTTACCTACTCCTCACCATCCGCCACCGTTGCAGCCTCCTCCT
CATCACCACCATACCCCGCATCAGTTCAACGTCCACGCCAAGAACTTTGTACAAGGTCAG
GGCAGAAATTATACACCAGTTGACAAAACACCAGAACGTCGTACGCCGCCAACTGCGACC
GCTTCCGCGAACGTTGATGGGCTTCCCATTAAAGATCTTAAAATAGCAAACAAAGGGCCC
AACAGTCCCAAGCAAAATGAAAAATCGATAGAGATCAGTCAGGTAAAACAAGTTCCTTCT
ATGGTAGATAAAGTTCCTCAAAAGATTGATTCAAAACAAACAAGTTCAATCTCTGACAAA
ATGGATGCTACCAACACTAACCAGGTTCCGGCGGTGGCAAGAAGTTTCCCGCCACAAACC
ACAGCTGCTGCATCAGCTGTAAAGATACCTCCAACTACTGGGAAGTCGGCCAAGGGACCG
TCGGCTCCGTTTTCAAGCGGCAAACAACCCTCTAAACCGGCGACACCTCAAACTGTTGTT
CCACTCCAGCAGACTGTATCGACTCCTAAAGCACCGTTTGCAAACAGACAAAAGCGTGAA
GGAACATCTAATCGATCACCATCAAATGATATGGGAGACAATAATGAGAGATCTATGGTC
ACAGAGCATATCAAAAGAGAACCACCACTACCTCCGAGTAAAGCGCCTATGCCAATATCT
ATTACGCTTCATTCTGCGGGTCAACCGTTGATTGTGACAAGTAAAGCGCCTTTCGGACAT
TCCCGAAAAGCTAGCGGAGCTCCAGAGCCACCACCCGCCCCTCAACCTCCACCACCAGCA
CCGACGGCTTCCGATTTCCCTCCACCACCGACACCTCGCAACCGTACCGAGCCACCACCG
CCTGTGGTACAGCCCCAACCGCAACCCGCGCCTGGCAAATCGTGGGCTAGTCTATTCTCT
TCGAAACCTAGTATACCTGCACCGGCGCCCGTTCCAGCAGTTGCAGCTCCTGTCGTTGAA
GAGTCAGTCAGCCCGATATCCAGTTCACCTCCTGTCGCTCCCAACTTGCAAAAACCGGTA
GCCAAAGTTCCACCGTTTGATGCCTCTCCCTTGCCGGGTGCCGCTCCCGATAAAAATGGT
CCGGTTCCAGCCTCGATTCCAGCGGTGTCGTATTCTGAGAAGACGTCGGTAAATTCTGGT
AGCACTCAGTCGCCACCAATGATAACTCCAAAACCGACGGCAGGCCAATCCCATGCCGAA
CAGCGTGAAGTTCCGGTACAACGCGATTCCCCCCCTGCCGTGCCACCGCAACCTTCACCT
TTCAGCGACGATCCTAATTCTTATCGAATGGGAGAATTTCTGACTAAATATCAGCTAGAT
CACCGTCCGGTCGCAATCTTGCCTCGCGGTTTGACTAACCGATCGAACTATTGCTATGTA
AATGCAATCTTGCAAGCGTTGATCGCGTGCCCTCCCTTCTACAACTTGCTCAAAGCCTTG
CCGTATCAAACACGTCGCGGCAAATCCAGCACACCAGTAATTGATTCCATGGTGGAACTA
TGCTACGAGTTCAGTGCAAACGGCACCACGACGACAACGAACGGGCGCGGTCGTGGAAGC
AACGCCAGCGCGGCGAGCACCGGG
(2544 bp)

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