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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4060_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_histone_deacetylase_3_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0003714 F transcription corepressor activity
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0017053 C transcription repressor complex
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070491 F DNA-binding transcription factor binding
GO:0070932 P histone H3 deacetylation
Transcript
Level		FPKM:4.24 TPM:4.26
ORF EntryO_BomoSK1284_complete:A_BomoSK_comp4060_c0_seq1
Sequence
(Nucleotide)
GAAGAATCAAAAATTATTCATAAATAAAAACATACCTTTTAACACAAAAAGTACTAATAT
CATTAGTATTATTAGATTTCCAAAAAGCAGTTCTCGATAGTTAATTATAATTAAAGCAGT
GATGACTTTTGCATCATTGTTAACGCATTATGAAGCGGCAGCATAAATCATGCTCGGCGA
CGTCCAGTTAACGAAGCGTTTAATAGTGATAGTTGTCATTTTGAGTATTATTTTTGTGTT
GAAAGAATTCGTATTTGTTTATCCACTATGACTCAACAAAGGGTAGCGTATTTCTATAAT
CCGGACGTGGGTAATTTCCACTACGGTCCAGGGCATCCAATGAAACCACACAGGCTGGCT
GTGACGCATTGTCTCGTGTTGAAGTATGGTCTTCATAAGAAAATGCAGATATATAAGCCG
TATAGGGCCAGCGCTCACGATATGTGCCGTTTCCACAGCGAGGACTACATAGAGTTTCTG
CAAAATGTAACTCCTCAAAATATACAGAGTTACTCAAAAGATCTTTTGCACTATAATGTT
GGAGACGACTGTCCAGTATTCGAAGGTCTTTTCGATTTCTGCTCAATGTACACTGGAGCT
TCATTGGAAGGTGCTATGAAGCTAAATAATAACACTTGTGACATTGCCATCAACTGGTCT
GGGGGCTTGCATCATGCAAAGAAATTTGAACCTTCCGGATTTTGCTACGTCAATGATATA
GTAATAGCAATTTTAGAGCTCCTAAAATATCATCCAAGGGTTCTGTACATAGATATTGAT
GTTCACCATGGAGATGGGGTTCAAGAAGCTTTTTACCTCACTGACCGAGTCATGACGGTT
AGTTTCCACAAGTATGGGAACTATTTCTTCCCTGGAACGGGAGATATGTATGAAATTGGT
GCAGAGAGTGGACGATATTATTCGGTAAATGTACCACTGAAAGAAGGCATAGATGATCAA
AGCTACATACAGGTATTTAAACCAGTGATCTCCTATGTGATGGAGTGGTATCAACCTACA
GCGATAGTACTGCAGTGCGGTGCTGACTCGCTGGCTGGCGATAGGCTTGGATGCTTCTCA
CTCTCAACTAGAGGTCATGGCGAGTGTGTGAATTTCGTTAAAAACTTAAATGTGCCAACC
CTGGTGGTGGGCGGAGGAGGATATACCTTGAGAAATGTAGCTCGCTGCTGGACTTACGAG
ACCTCACTTCTTGTGGACGAACAGATCTCCAATGAGCTTCCATATAATGAGTACTTAGAG
TTCTTTGCACCAGATCTTCAGTTGCATCCAGAGATCAGCAGGCCTGAAAGCACAAACAAT
GCCAATAGCAAAGCTTATTTAGAAGCTATAACCAAATATGTATGCGATAATCTGAAGATG
TGTCAACACTCGCCCGCAGTACAAATGACTCATATACCAGGTGACTTCTTCCCTGAAGAT
TACCGAATCAAGGACGAACCCGATCCTGACGTTCGTATCAGTCAGGACGATGCTGACAAA
ATGGTGGAGCCCAAAAACGAGTTTTACGAAGACGAGAAAGATAACGATAAGGAGTTGCCA
CCAGAGATTAAGGATCCATAGCAAATAGAACTGCCTCCGGATCCCCTCGCTATATGACAT
GTGCACAAGAAGTACAGAATGAGCATTTTAGCTCTAGCAGACTAAGGCACCGGAGGTAGA
CAGTGATTTGAAAACGTTAATAAAGTGTTTGTGTTAGGTCTGTTAAGTGTAAAAAAAAAA
ACATTATAGTGCCAGTGTTTTTTTGATTGCAGTGGGTATGGCTTCTTTACCGTAACACTA
GAAACAAATTACATTCCACATCAAACAATCATGGCAATATTGGTATTAATTTTATTGTGA
ATATATTAAATAGAGTAATACTACGTAATATTACAACGGCTTTAACAGTATAGAGTGAAA
ATTTTGGATGTTGTATGATTTCAATGTATGTTATTATGATAAATATAAGTTTTAACTTTC
TTTTTTTATAGCTTAGATGGGTG
(2003 bp)

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