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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4047_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010216 P maintenance of DNA methylation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042393 F histone binding
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0071158 P regulation of cell cycle
GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
Transcript
Level		FPKM:3.82 TPM:3.84
ORF EntryO_BomoSK1261_complete:A_BomoSK_comp4047_c0_seq2
Sequence
(Nucleotide)
ATTCGGTTAGGTACGCTTCAAATTTAGAATCATATTTATTTAGTAAATTAAAGATATTCC
ATTTAAAGGCAAATAAAGTAGTAATTTTTTACGAAAATGCATGTTCGTATCAGGATGCTT
GGGAAACCTGATACAATAGTTGTAGTGGAATCGAAACTAACAAAAATAGACCATTTTAGA
AAAATTCTACGAGATAAATTCGACGTCCAACCAAAATTACAGCGGTTGTTTTATGGAGGA
AAGTTGCTTGAAAATGGCTACACATTTCATGATTACAATATAAAATTAAATGATGTCATC
CAACTTATGGTCAAAATAAACACAGATAGTCCAAAAAAGAGCCTCACGAAGTCTACAGCT
GATGACAAAACTGACAGTGATAATAACAAAAATCATGAACAAGAATCTTCTGATGCTGTG
TATACAGATGCAGTCAGCAAGCTCTATGCTGTTGGAGACTTGGTCGACGTAAGGGACCCA
GAACACGGCGCTTGGTTCGAGAGTAAAATAATTAGAATAGTCCATGATCAGAAGGGAAAG
AAATCGGAACATGAAAAAGAGAAGGGATCTGACACTTCTAGTTCTTATCAAAGTCAAAAT
TATGACTGCAATGACTTAGAGAACAAACCACCCATAGAAATGAATGGTGATTGTAAACCA
AAGAGTAAAGGTATAGCTAAATACTTCACAAAAAGTCCTAAAGGAAAGAAAAAAGACAAA
GATTCTAAGAGTGAGACCAGAATAGTTGATAACCTTCTTTATAAAGTGCAACTTGATAAT
GACGAAGACGACTCAGAATCTTACTGCAAAGAAAAAGACATAAGGCCACGAGCACGAACC
ATTATTGACATTAAGGATTTGAAAGTTGGACAAACAGTGATGGTGAATTACAATATTGAG
GAGCCAATGGAAAAAGGTTATTGGTTCGATTTCAAAGTAAGTGAAATAAGGAAACTACGC
ACCAGCTATGATTTAGTGGGAACTTTATATTTGGGTCCCGAAGCAGTACCTCAGAATGAC
ACCAAAATAAGATTGCAGGACAAAATTTTTGCCATAGAAGAAGTTGTACCACTGGAAAAG
CGCAGTGATGAATACAATAGATTAATGACTATGAATCCTGAAAAACGGTCTCAACCATTA
ACTTGTTTGACTTGTCGTGATGATGAAGAAGCACTATGTAAAGACTGCGGTTGCTATGTC
TGCCTAGGAAAAGAGTTTCCTGAAAAGATAGTGCTCTGTGACGAGTGCAACTACGGCTAT
CACATGAGCTGTCTCAAACCTCCATTAAAAGATCTTCCCGACGAGGACTGGTATTGCCCT
TCTTGTAAAAGAGATCCTCAGGATGTAGTAGCGCCAGGAGCAGCCAAACAAACCAAGAAA
AAAAATGCTTCACAGAGTAAACGCGATTGGGGCAGAGGAATGGCATGTGTTGGTAAGACG
AAAACATGCGCTATGCCTGCCAACCATTTTGGACCGATCCCTGGCATCGAAGTTGGTATG
TGTTGGCGGTTCAGGATTCAGTTATCCGAGTCTGGCGTGCATCGGCCGCCCGTGTCAGGA
ATCCACGGACGTGACGTAGAAGGCGCTTATAGCATTGTTTTATCCGGTGGATATGAAGAT
GACGTTGACAATGGCAATGAGTTCACGTACACGGGAAGCGGAGGTCGTGATCTATCCGGG
AACAAGAGAACCGCCGAACAGTCGTGTGACCAGACCCTCACTAGAGAGAACAAGGCTTTG
GCCAGGAACTGCGCTGTTAACCAAATCAAAGAAGACGGTGCTGACGCAGGTGAGAATTGG
AAGAACGGGAAACCGGTCAGAGTTGTGAGATCCTACAAAATGATGAAGCACTTTCCGAAG
TACGCGCCCAGCGAGGGGATCAGATACGACGGTATCTACAAAGTTGTAAAGTACTATCCA
GAGAAGGGTCTGTCTGGCTACAGAGTATGGAAGTATTTACTGCGTAGAGACGATCCCAGT
CCAGCGCCGTGGGAAGCTGGGGCTAAACATTATCCCATTGTGTATCCAGACGGTTATTTG
GAAGCCGAGGCGGAGAAGAAAGCTTTGAAGCAGAAACAAAATACCAAATCGAAAGGAAAA
GTGACAAAGAAGAGGGCGCTGCGAGAGAGCAACCAGTCTGCCGAGTCGGAGTGTGATATC
TCCCCTCCCGCGAAGAAACGGAAAACCGCAAGCGAGAACAAGAGAAAAGGAAAATCATCA
AAAACGAAATCGACGACAAGCCCAAATGGTAGTATTTTAGAAATGTTCTCACCGAAAAGA
AGGAATTCTGCTAATGGGATGAAACAAGTTAAAAAATCGGAAAGTGTACTTACCAGCGAG
GAAAGGGACGCAATTAAAGCTGACACGTTGAATAGCAAGTTATGGGGCGAATGTTTGGCT
GTGTGCGATAGCTGGGGCAAAAAGGAATTTGTTGAATTTGTATCAATGCAGTTCCTCTGT
ATTATATGTCAAGAGGTCGCAGCTAGTCCTGTAACGACACCTTGCCTACATAACTTCTGT
ATGGCGTGTTTAAAATTGGCCTTCAAAACAACCGGAGCGATTTGTCCGTGCTGCAGACAG
AACTTAGCAAAATATGAACCGGAGCCTAACGAAGAGTTGAAAACCGCACTACGTAGCATC
ATGACCGGCTACGACGCTGGAAAGAAGTAATTTTAAAATAATAGACTATGTAAGAGCTAG
TAATTTCTATGATAAACAAATATTAGGTTCAAATCCATTAGTAATTAGAGTTAAATTTTC
TTACCAGATTTTACAAAAAAAATGTAAAGTAAAATGTTTATGATTGGCACTCCCTCGGAC
CGCAGTAGACATTTTTTAATATAGCTGGTATAATATATGCTGCGGGAAAAAAAATTCATC
ACGTTGAGATGCTGAATAAAAATGCACTGTAAAATTCACATGAACAGGTTTTTTGAAAAC
GGTTTTAATTTATTTTTAACAACAAGT
(2967 bp)

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